Gene : orange1.1g043878m.g C. sinensis v1.1
Defline:  (1 of 1) PF00505//PF03145 - HMG (high mobility group) box (HMG_box) // Seven in absentia protein family (Sina) Genomic Order:  28
Name:  ? orange1.1g043878m.g Secondary Identifier:  ? PAC:18131197
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g043878m.g 0.5kb upstream 0.5kb upstream 3576 true scaffold00042: 165667-169242 Citrus sinensis
orange1.1g043878m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00042: 168743-169242 Citrus sinensis
orange1.1g043878m.g 0.5kb downstream 0.5kb downstream 3576 true scaffold00042: 165167-168742 Citrus sinensis
orange1.1g043878m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00042: 165167-165666 Citrus sinensis
orange1.1g043878m.g 1.0kb upstream 1.0kb upstream 4076 true scaffold00042: 165667-169742 Citrus sinensis
orange1.1g043878m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00042: 168743-169742 Citrus sinensis
orange1.1g043878m.g 1.0kb downstream 1.0kb downstream 4076 true scaffold00042: 164667-168742 Citrus sinensis
orange1.1g043878m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00042: 164667-165666 Citrus sinensis
orange1.1g043878m.g 2.0kb upstream 2.0kb upstream 5076 true scaffold00042: 165667-170742 Citrus sinensis
orange1.1g043878m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00042: 168743-170742 Citrus sinensis
orange1.1g043878m.g 2.0kb downstream 2.0kb downstream 5076 true scaffold00042: 163667-168742 Citrus sinensis
orange1.1g043878m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00042: 163667-165666 Citrus sinensis
orange1.1g043878m.g 5.0kb upstream 5.0kb upstream 8076 true scaffold00042: 165667-173742 Citrus sinensis
orange1.1g043878m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00042: 168743-173742 Citrus sinensis
orange1.1g043878m.g 5.0kb downstream 5.0kb downstream 8076 true scaffold00042: 160667-168742 Citrus sinensis
orange1.1g043878m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00042: 160667-165666 Citrus sinensis
orange1.1g043878m.g 10.0kb upstream 10.0kb upstream 13076 true scaffold00042: 165667-178742 Citrus sinensis
orange1.1g043878m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00042: 168743-178742 Citrus sinensis
orange1.1g043878m.g 10.0kb downstream 10.0kb downstream 13076 true scaffold00042: 155667-168742 Citrus sinensis
orange1.1g043878m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00042: 155667-165666 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348540 5266 SBM View MSA
124246014 5268 Malvidae View MSA
124070638 5270 Rosid View MSA
123752876 5271 Pentapetalae View MSA
122774837 5272 Eudicot View MSA
122051701 5273 Angiosperm View MSA
121312620 5274 Embryophyte View MSA
123349775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain