Gene : orange1.1g001045m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10459:SF38 - DNA LIGASE Genomic Order:  53
Name:  ? orange1.1g001045m.g Secondary Identifier:  ? PAC:18131152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001045m.g 0.5kb upstream 0.5kb upstream 10289 true scaffold00042: 282259-292547 Citrus sinensis
orange1.1g001045m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00042: 282259-282758 Citrus sinensis
orange1.1g001045m.g 0.5kb downstream 0.5kb downstream 10289 true scaffold00042: 282759-293047 Citrus sinensis
orange1.1g001045m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00042: 292548-293047 Citrus sinensis
orange1.1g001045m.g 1.0kb upstream 1.0kb upstream 10789 true scaffold00042: 281759-292547 Citrus sinensis
orange1.1g001045m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00042: 281759-282758 Citrus sinensis
orange1.1g001045m.g 1.0kb downstream 1.0kb downstream 10789 true scaffold00042: 282759-293547 Citrus sinensis
orange1.1g001045m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00042: 292548-293547 Citrus sinensis
orange1.1g001045m.g 2.0kb upstream 2.0kb upstream 11789 true scaffold00042: 280759-292547 Citrus sinensis
orange1.1g001045m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00042: 280759-282758 Citrus sinensis
orange1.1g001045m.g 2.0kb downstream 2.0kb downstream 11789 true scaffold00042: 282759-294547 Citrus sinensis
orange1.1g001045m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00042: 292548-294547 Citrus sinensis
orange1.1g001045m.g 5.0kb upstream 5.0kb upstream 14789 true scaffold00042: 277759-292547 Citrus sinensis
orange1.1g001045m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00042: 277759-282758 Citrus sinensis
orange1.1g001045m.g 5.0kb downstream 5.0kb downstream 14789 true scaffold00042: 282759-297547 Citrus sinensis
orange1.1g001045m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00042: 292548-297547 Citrus sinensis
orange1.1g001045m.g 10.0kb upstream 10.0kb upstream 19789 true scaffold00042: 272759-292547 Citrus sinensis
orange1.1g001045m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00042: 272759-282758 Citrus sinensis
orange1.1g001045m.g 10.0kb downstream 10.0kb downstream 19789 true scaffold00042: 282759-302547 Citrus sinensis
orange1.1g001045m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00042: 292548-302547 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339147 5266 SBM View MSA
124243523 5268 Malvidae View MSA
124063410 5270 Rosid View MSA
123738713 5271 Pentapetalae View MSA
122788649 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain