Gene : orange1.1g021803m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE Genomic Order:  11
Name:  ? orange1.1g021803m.g Secondary Identifier:  ? PAC:18128497
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g021803m.g 0.5kb upstream 0.5kb upstream 3512 true scaffold00043: 97950-101461 Citrus sinensis
orange1.1g021803m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00043: 97950-98449 Citrus sinensis
orange1.1g021803m.g 0.5kb downstream 0.5kb downstream 3512 true scaffold00043: 98450-101961 Citrus sinensis
orange1.1g021803m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00043: 101462-101961 Citrus sinensis
orange1.1g021803m.g 1.0kb upstream 1.0kb upstream 4012 true scaffold00043: 97450-101461 Citrus sinensis
orange1.1g021803m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00043: 97450-98449 Citrus sinensis
orange1.1g021803m.g 1.0kb downstream 1.0kb downstream 4012 true scaffold00043: 98450-102461 Citrus sinensis
orange1.1g021803m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00043: 101462-102461 Citrus sinensis
orange1.1g021803m.g 2.0kb upstream 2.0kb upstream 5012 true scaffold00043: 96450-101461 Citrus sinensis
orange1.1g021803m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00043: 96450-98449 Citrus sinensis
orange1.1g021803m.g 2.0kb downstream 2.0kb downstream 5012 true scaffold00043: 98450-103461 Citrus sinensis
orange1.1g021803m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00043: 101462-103461 Citrus sinensis
orange1.1g021803m.g 5.0kb upstream 5.0kb upstream 8012 true scaffold00043: 93450-101461 Citrus sinensis
orange1.1g021803m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00043: 93450-98449 Citrus sinensis
orange1.1g021803m.g 5.0kb downstream 5.0kb downstream 8012 true scaffold00043: 98450-106461 Citrus sinensis
orange1.1g021803m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00043: 101462-106461 Citrus sinensis
orange1.1g021803m.g 10.0kb upstream 10.0kb upstream 13012 true scaffold00043: 88450-101461 Citrus sinensis
orange1.1g021803m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00043: 88450-98449 Citrus sinensis
orange1.1g021803m.g 10.0kb downstream 10.0kb downstream 13012 true scaffold00043: 98450-111461 Citrus sinensis
orange1.1g021803m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00043: 101462-111461 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348970 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain