Gene : orange1.1g048016m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  9
Name:  ? orange1.1g048016m.g Secondary Identifier:  ? PAC:18119132
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5980 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048016m.g 0.5kb upstream 0.5kb upstream 3275 true scaffold00087: 86270-89544 Citrus sinensis
orange1.1g048016m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00087: 86270-86769 Citrus sinensis
orange1.1g048016m.g 0.5kb downstream 0.5kb downstream 3275 true scaffold00087: 86770-90044 Citrus sinensis
orange1.1g048016m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00087: 89545-90044 Citrus sinensis
orange1.1g048016m.g 1.0kb upstream 1.0kb upstream 3775 true scaffold00087: 85770-89544 Citrus sinensis
orange1.1g048016m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00087: 85770-86769 Citrus sinensis
orange1.1g048016m.g 1.0kb downstream 1.0kb downstream 3775 true scaffold00087: 86770-90544 Citrus sinensis
orange1.1g048016m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00087: 89545-90544 Citrus sinensis
orange1.1g048016m.g 2.0kb upstream 2.0kb upstream 4775 true scaffold00087: 84770-89544 Citrus sinensis
orange1.1g048016m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00087: 84770-86769 Citrus sinensis
orange1.1g048016m.g 2.0kb downstream 2.0kb downstream 4775 true scaffold00087: 86770-91544 Citrus sinensis
orange1.1g048016m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00087: 89545-91544 Citrus sinensis
orange1.1g048016m.g 5.0kb upstream 5.0kb upstream 7775 true scaffold00087: 81770-89544 Citrus sinensis
orange1.1g048016m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00087: 81770-86769 Citrus sinensis
orange1.1g048016m.g 5.0kb downstream 5.0kb downstream 7775 true scaffold00087: 86770-94544 Citrus sinensis
orange1.1g048016m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00087: 89545-94544 Citrus sinensis
orange1.1g048016m.g 10.0kb upstream 10.0kb upstream 12775 true scaffold00087: 76770-89544 Citrus sinensis
orange1.1g048016m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00087: 76770-86769 Citrus sinensis
orange1.1g048016m.g 10.0kb downstream 10.0kb downstream 12775 true scaffold00087: 86770-99544 Citrus sinensis
orange1.1g048016m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00087: 89545-99544 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain