Gene : orange1.1g009198m.g C. sinensis v1.1
Defline:  (1 of 1) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase Genomic Order:  11
Name:  ? orange1.1g009198m.g Secondary Identifier:  ? PAC:18138422
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis CAROTENOID-PWY Citrus sinensis pathologic  
Csinensis PWY-6475 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009198m.g 0.5kb upstream 0.5kb upstream 14795 true scaffold00154: 314429-329223 Citrus sinensis
orange1.1g009198m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00154: 314429-314928 Citrus sinensis
orange1.1g009198m.g 0.5kb downstream 0.5kb downstream 14795 true scaffold00154: 314929-329723 Citrus sinensis
orange1.1g009198m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00154: 329224-329723 Citrus sinensis
orange1.1g009198m.g 1.0kb upstream 1.0kb upstream 15295 true scaffold00154: 313929-329223 Citrus sinensis
orange1.1g009198m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00154: 313929-314928 Citrus sinensis
orange1.1g009198m.g 1.0kb downstream 1.0kb downstream 15295 true scaffold00154: 314929-330223 Citrus sinensis
orange1.1g009198m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00154: 329224-330223 Citrus sinensis
orange1.1g009198m.g 2.0kb upstream 2.0kb upstream 16295 true scaffold00154: 312929-329223 Citrus sinensis
orange1.1g009198m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00154: 312929-314928 Citrus sinensis
orange1.1g009198m.g 2.0kb downstream 2.0kb downstream 16295 true scaffold00154: 314929-331223 Citrus sinensis
orange1.1g009198m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00154: 329224-331223 Citrus sinensis
orange1.1g009198m.g 5.0kb upstream 5.0kb upstream 19295 true scaffold00154: 309929-329223 Citrus sinensis
orange1.1g009198m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00154: 309929-314928 Citrus sinensis
orange1.1g009198m.g 5.0kb downstream 5.0kb downstream 19295 true scaffold00154: 314929-334223 Citrus sinensis
orange1.1g009198m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00154: 329224-334223 Citrus sinensis
orange1.1g009198m.g 10.0kb upstream 10.0kb upstream 24295 true scaffold00154: 304929-329223 Citrus sinensis
orange1.1g009198m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00154: 304929-314928 Citrus sinensis
orange1.1g009198m.g 10.0kb downstream 10.0kb downstream 21412 true scaffold00154: 314929-336340 Citrus sinensis
orange1.1g009198m.g 10.0kb downstream 10.0kb downstream 7117 false scaffold00154: 329224-336340 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121529886 5273 Angiosperm Singleton cluster - no MSA
124329487 5266 SBM Singleton cluster - no MSA
124174740 5268 Malvidae Singleton cluster - no MSA
123897275 5270 Rosid Singleton cluster - no MSA
123479134 5271 Pentapetalae Singleton cluster - no MSA
122514386 5272 Eudicot Singleton cluster - no MSA
120802648 5274 Embryophyte Singleton cluster - no MSA
122844202 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain