Gene : orange1.1g027919m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR31238:SF39 - GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 1-RELATED Genomic Order:  15
Name:  ? orange1.1g027919m.g Secondary Identifier:  ? PAC:18129993
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis DETOX1-PWY Citrus sinensis pathologic  
Csinensis DETOX1-PWY-1 Citrus sinensis pathologic  
Csinensis PWY-6854 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027919m.g 0.5kb upstream 0.5kb upstream 2225 true scaffold00102: 151911-154135 Citrus sinensis
orange1.1g027919m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00102: 153636-154135 Citrus sinensis
orange1.1g027919m.g 0.5kb downstream 0.5kb downstream 2225 true scaffold00102: 151411-153635 Citrus sinensis
orange1.1g027919m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00102: 151411-151910 Citrus sinensis
orange1.1g027919m.g 1.0kb upstream 1.0kb upstream 2725 true scaffold00102: 151911-154635 Citrus sinensis
orange1.1g027919m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00102: 153636-154635 Citrus sinensis
orange1.1g027919m.g 1.0kb downstream 1.0kb downstream 2725 true scaffold00102: 150911-153635 Citrus sinensis
orange1.1g027919m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00102: 150911-151910 Citrus sinensis
orange1.1g027919m.g 2.0kb upstream 2.0kb upstream 3725 true scaffold00102: 151911-155635 Citrus sinensis
orange1.1g027919m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00102: 153636-155635 Citrus sinensis
orange1.1g027919m.g 2.0kb downstream 2.0kb downstream 3725 true scaffold00102: 149911-153635 Citrus sinensis
orange1.1g027919m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00102: 149911-151910 Citrus sinensis
orange1.1g027919m.g 5.0kb upstream 5.0kb upstream 6725 true scaffold00102: 151911-158635 Citrus sinensis
orange1.1g027919m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00102: 153636-158635 Citrus sinensis
orange1.1g027919m.g 5.0kb downstream 5.0kb downstream 6725 true scaffold00102: 146911-153635 Citrus sinensis
orange1.1g027919m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00102: 146911-151910 Citrus sinensis
orange1.1g027919m.g 10.0kb upstream 10.0kb upstream 11725 true scaffold00102: 151911-163635 Citrus sinensis
orange1.1g027919m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00102: 153636-163635 Citrus sinensis
orange1.1g027919m.g 10.0kb downstream 10.0kb downstream 11725 true scaffold00102: 141911-153635 Citrus sinensis
orange1.1g027919m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00102: 141911-151910 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041466 5273 Angiosperm View MSA
124343643 5266 SBM View MSA
124244978 5268 Malvidae View MSA
124073822 5270 Rosid View MSA
123750442 5271 Pentapetalae View MSA
122795274 5272 Eudicot View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain