Gene : orange1.1g012904m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Genomic Order:  27
Name:  ? orange1.1g012904m.g Secondary Identifier:  ? PAC:18100781
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012904m.g 0.5kb upstream 0.5kb upstream 4802 true scaffold00138: 177962-182763 Citrus sinensis
orange1.1g012904m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00138: 177962-178461 Citrus sinensis
orange1.1g012904m.g 0.5kb downstream 0.5kb downstream 4802 true scaffold00138: 178462-183263 Citrus sinensis
orange1.1g012904m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00138: 182764-183263 Citrus sinensis
orange1.1g012904m.g 1.0kb upstream 1.0kb upstream 5302 true scaffold00138: 177462-182763 Citrus sinensis
orange1.1g012904m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00138: 177462-178461 Citrus sinensis
orange1.1g012904m.g 1.0kb downstream 1.0kb downstream 5302 true scaffold00138: 178462-183763 Citrus sinensis
orange1.1g012904m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00138: 182764-183763 Citrus sinensis
orange1.1g012904m.g 2.0kb upstream 2.0kb upstream 6302 true scaffold00138: 176462-182763 Citrus sinensis
orange1.1g012904m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00138: 176462-178461 Citrus sinensis
orange1.1g012904m.g 2.0kb downstream 2.0kb downstream 6302 true scaffold00138: 178462-184763 Citrus sinensis
orange1.1g012904m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00138: 182764-184763 Citrus sinensis
orange1.1g012904m.g 5.0kb upstream 5.0kb upstream 9302 true scaffold00138: 173462-182763 Citrus sinensis
orange1.1g012904m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00138: 173462-178461 Citrus sinensis
orange1.1g012904m.g 5.0kb downstream 5.0kb downstream 9302 true scaffold00138: 178462-187763 Citrus sinensis
orange1.1g012904m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00138: 182764-187763 Citrus sinensis
orange1.1g012904m.g 10.0kb upstream 10.0kb upstream 14302 true scaffold00138: 168462-182763 Citrus sinensis
orange1.1g012904m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00138: 168462-178461 Citrus sinensis
orange1.1g012904m.g 10.0kb downstream 10.0kb downstream 14302 true scaffold00138: 178462-192763 Citrus sinensis
orange1.1g012904m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00138: 182764-192763 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342449 5266 SBM View MSA
124239741 5268 Malvidae View MSA
124062245 5270 Rosid View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain