Gene : orange1.1g002340m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12135 - DNA REPAIR PROTEIN XP-C / RAD4 Genomic Order:  7
Name:  ? orange1.1g002340m.g Secondary Identifier:  ? PAC:18115159
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002340m.g 0.5kb upstream 0.5kb upstream 7589 true scaffold00197: 35507-43095 Citrus sinensis
orange1.1g002340m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00197: 42596-43095 Citrus sinensis
orange1.1g002340m.g 0.5kb downstream 0.5kb downstream 7589 true scaffold00197: 35007-42595 Citrus sinensis
orange1.1g002340m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00197: 35007-35506 Citrus sinensis
orange1.1g002340m.g 1.0kb upstream 1.0kb upstream 8089 true scaffold00197: 35507-43595 Citrus sinensis
orange1.1g002340m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00197: 42596-43595 Citrus sinensis
orange1.1g002340m.g 1.0kb downstream 1.0kb downstream 8089 true scaffold00197: 34507-42595 Citrus sinensis
orange1.1g002340m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00197: 34507-35506 Citrus sinensis
orange1.1g002340m.g 2.0kb upstream 2.0kb upstream 9089 true scaffold00197: 35507-44595 Citrus sinensis
orange1.1g002340m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00197: 42596-44595 Citrus sinensis
orange1.1g002340m.g 2.0kb downstream 2.0kb downstream 9089 true scaffold00197: 33507-42595 Citrus sinensis
orange1.1g002340m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00197: 33507-35506 Citrus sinensis
orange1.1g002340m.g 5.0kb upstream 5.0kb upstream 12089 true scaffold00197: 35507-47595 Citrus sinensis
orange1.1g002340m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00197: 42596-47595 Citrus sinensis
orange1.1g002340m.g 5.0kb downstream 5.0kb downstream 12089 true scaffold00197: 30507-42595 Citrus sinensis
orange1.1g002340m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00197: 30507-35506 Citrus sinensis
orange1.1g002340m.g 10.0kb upstream 10.0kb upstream 17089 true scaffold00197: 35507-52595 Citrus sinensis
orange1.1g002340m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00197: 42596-52595 Citrus sinensis
orange1.1g002340m.g 10.0kb downstream 10.0kb downstream 17089 true scaffold00197: 25507-42595 Citrus sinensis
orange1.1g002340m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00197: 25507-35506 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340852 5266 SBM View MSA
124242768 5268 Malvidae View MSA
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain