Gene : orange1.1g016909m.g C. sinensis v1.1
Defline:  (1 of 3) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  13
Name:  ? orange1.1g016909m.g Secondary Identifier:  ? PAC:18093770
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5046 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g016909m.g 0.5kb upstream 0.5kb upstream 5111 true scaffold00200: 218908-224018 Citrus sinensis
orange1.1g016909m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00200: 218908-219407 Citrus sinensis
orange1.1g016909m.g 0.5kb downstream 0.5kb downstream 5111 true scaffold00200: 219408-224518 Citrus sinensis
orange1.1g016909m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00200: 224019-224518 Citrus sinensis
orange1.1g016909m.g 1.0kb upstream 1.0kb upstream 5611 true scaffold00200: 218408-224018 Citrus sinensis
orange1.1g016909m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00200: 218408-219407 Citrus sinensis
orange1.1g016909m.g 1.0kb downstream 1.0kb downstream 5611 true scaffold00200: 219408-225018 Citrus sinensis
orange1.1g016909m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00200: 224019-225018 Citrus sinensis
orange1.1g016909m.g 2.0kb upstream 2.0kb upstream 6611 true scaffold00200: 217408-224018 Citrus sinensis
orange1.1g016909m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00200: 217408-219407 Citrus sinensis
orange1.1g016909m.g 2.0kb downstream 2.0kb downstream 6611 true scaffold00200: 219408-226018 Citrus sinensis
orange1.1g016909m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00200: 224019-226018 Citrus sinensis
orange1.1g016909m.g 5.0kb upstream 5.0kb upstream 9611 true scaffold00200: 214408-224018 Citrus sinensis
orange1.1g016909m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00200: 214408-219407 Citrus sinensis
orange1.1g016909m.g 5.0kb downstream 5.0kb downstream 9611 true scaffold00200: 219408-229018 Citrus sinensis
orange1.1g016909m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00200: 224019-229018 Citrus sinensis
orange1.1g016909m.g 10.0kb upstream 10.0kb upstream 14611 true scaffold00200: 209408-224018 Citrus sinensis
orange1.1g016909m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00200: 209408-219407 Citrus sinensis
orange1.1g016909m.g 10.0kb downstream 10.0kb downstream 14611 true scaffold00200: 219408-234018 Citrus sinensis
orange1.1g016909m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00200: 224019-234018 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346175 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain