Gene : orange1.1g006828m.g C. sinensis v1.1
Defline:  (1 of 9) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  12
Name:  ? orange1.1g006828m.g Secondary Identifier:  ? PAC:18113651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g006828m.g 0.5kb upstream 0.5kb upstream 2437 true scaffold00269: 88375-90811 Citrus sinensis
orange1.1g006828m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00269: 88375-88874 Citrus sinensis
orange1.1g006828m.g 0.5kb downstream 0.5kb downstream 2437 true scaffold00269: 88875-91311 Citrus sinensis
orange1.1g006828m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00269: 90812-91311 Citrus sinensis
orange1.1g006828m.g 1.0kb upstream 1.0kb upstream 2937 true scaffold00269: 87875-90811 Citrus sinensis
orange1.1g006828m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00269: 87875-88874 Citrus sinensis
orange1.1g006828m.g 1.0kb downstream 1.0kb downstream 2937 true scaffold00269: 88875-91811 Citrus sinensis
orange1.1g006828m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00269: 90812-91811 Citrus sinensis
orange1.1g006828m.g 2.0kb upstream 2.0kb upstream 3937 true scaffold00269: 86875-90811 Citrus sinensis
orange1.1g006828m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00269: 86875-88874 Citrus sinensis
orange1.1g006828m.g 2.0kb downstream 2.0kb downstream 3937 true scaffold00269: 88875-92811 Citrus sinensis
orange1.1g006828m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00269: 90812-92811 Citrus sinensis
orange1.1g006828m.g 5.0kb upstream 5.0kb upstream 6937 true scaffold00269: 83875-90811 Citrus sinensis
orange1.1g006828m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00269: 83875-88874 Citrus sinensis
orange1.1g006828m.g 5.0kb downstream 5.0kb downstream 6937 true scaffold00269: 88875-95811 Citrus sinensis
orange1.1g006828m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00269: 90812-95811 Citrus sinensis
orange1.1g006828m.g 10.0kb upstream 10.0kb upstream 11937 true scaffold00269: 78875-90811 Citrus sinensis
orange1.1g006828m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00269: 78875-88874 Citrus sinensis
orange1.1g006828m.g 10.0kb downstream 10.0kb downstream 11937 true scaffold00269: 88875-100811 Citrus sinensis
orange1.1g006828m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00269: 90812-100811 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338277 5266 SBM View MSA
124253763 5268 Malvidae View MSA
124067800 5270 Rosid View MSA
123746554 5271 Pentapetalae View MSA
122791387 5272 Eudicot View MSA
122048006 5273 Angiosperm View MSA
123428983 5275 Viridiplantae View MSA
121310828 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain