Gene : orange1.1g029458m.g C. sinensis v1.1
Defline:  (1 of 1) KOG2424 - Protein involved in transcription start site selection Genomic Order:  3
Name:  ? orange1.1g029458m.g Secondary Identifier:  ? PAC:18139706
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g029458m.g 0.5kb upstream 0.5kb upstream 5279 true scaffold00360: 60167-65445 Citrus sinensis
orange1.1g029458m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00360: 60167-60666 Citrus sinensis
orange1.1g029458m.g 0.5kb downstream 0.5kb downstream 5279 true scaffold00360: 60667-65945 Citrus sinensis
orange1.1g029458m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00360: 65446-65945 Citrus sinensis
orange1.1g029458m.g 1.0kb upstream 1.0kb upstream 5779 true scaffold00360: 59667-65445 Citrus sinensis
orange1.1g029458m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00360: 59667-60666 Citrus sinensis
orange1.1g029458m.g 1.0kb downstream 1.0kb downstream 5779 true scaffold00360: 60667-66445 Citrus sinensis
orange1.1g029458m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00360: 65446-66445 Citrus sinensis
orange1.1g029458m.g 2.0kb upstream 2.0kb upstream 6779 true scaffold00360: 58667-65445 Citrus sinensis
orange1.1g029458m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00360: 58667-60666 Citrus sinensis
orange1.1g029458m.g 2.0kb downstream 2.0kb downstream 6779 true scaffold00360: 60667-67445 Citrus sinensis
orange1.1g029458m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00360: 65446-67445 Citrus sinensis
orange1.1g029458m.g 5.0kb upstream 5.0kb upstream 9779 true scaffold00360: 55667-65445 Citrus sinensis
orange1.1g029458m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00360: 55667-60666 Citrus sinensis
orange1.1g029458m.g 5.0kb downstream 5.0kb downstream 9779 true scaffold00360: 60667-70445 Citrus sinensis
orange1.1g029458m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00360: 65446-70445 Citrus sinensis
orange1.1g029458m.g 10.0kb upstream 10.0kb upstream 14779 true scaffold00360: 50667-65445 Citrus sinensis
orange1.1g029458m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00360: 50667-60666 Citrus sinensis
orange1.1g029458m.g 10.0kb downstream 10.0kb downstream 14779 true scaffold00360: 60667-75445 Citrus sinensis
orange1.1g029458m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00360: 65446-75445 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124336639 5266 SBM View MSA
124243441 5268 Malvidae View MSA
124062174 5270 Rosid View MSA
123740216 5271 Pentapetalae View MSA
122793137 5272 Eudicot View MSA
122048032 5273 Angiosperm View MSA
121343960 5274 Embryophyte View MSA
123424533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain