Gene : orange1.1g039882m.g C. sinensis v1.1
Defline:  (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  9
Name:  ? orange1.1g039882m.g Secondary Identifier:  ? PAC:18107191
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039882m.g 0.5kb upstream 0.5kb upstream 4434 true scaffold00604: 83168-87601 Citrus sinensis
orange1.1g039882m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00604: 87102-87601 Citrus sinensis
orange1.1g039882m.g 0.5kb downstream 0.5kb downstream 4434 true scaffold00604: 82668-87101 Citrus sinensis
orange1.1g039882m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00604: 82668-83167 Citrus sinensis
orange1.1g039882m.g 1.0kb upstream 1.0kb upstream 4934 true scaffold00604: 83168-88101 Citrus sinensis
orange1.1g039882m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00604: 87102-88101 Citrus sinensis
orange1.1g039882m.g 1.0kb downstream 1.0kb downstream 4934 true scaffold00604: 82168-87101 Citrus sinensis
orange1.1g039882m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00604: 82168-83167 Citrus sinensis
orange1.1g039882m.g 2.0kb upstream 2.0kb upstream 5934 true scaffold00604: 83168-89101 Citrus sinensis
orange1.1g039882m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00604: 87102-89101 Citrus sinensis
orange1.1g039882m.g 2.0kb downstream 2.0kb downstream 5934 true scaffold00604: 81168-87101 Citrus sinensis
orange1.1g039882m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00604: 81168-83167 Citrus sinensis
orange1.1g039882m.g 5.0kb upstream 5.0kb upstream 8934 true scaffold00604: 83168-92101 Citrus sinensis
orange1.1g039882m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00604: 87102-92101 Citrus sinensis
orange1.1g039882m.g 5.0kb downstream 5.0kb downstream 8934 true scaffold00604: 78168-87101 Citrus sinensis
orange1.1g039882m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00604: 78168-83167 Citrus sinensis
orange1.1g039882m.g 10.0kb upstream 10.0kb upstream 13934 true scaffold00604: 83168-97101 Citrus sinensis
orange1.1g039882m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00604: 87102-97101 Citrus sinensis
orange1.1g039882m.g 10.0kb downstream 10.0kb downstream 13934 true scaffold00604: 73168-87101 Citrus sinensis
orange1.1g039882m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00604: 73168-83167 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345424 5266 SBM View MSA
124237184 5268 Malvidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain