Gene : orange1.1g007978m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR13900 - TRANSCRIPTION INITIATION FACTOR TFIID Genomic Order:  7
Name:  ? orange1.1g007978m.g Secondary Identifier:  ? PAC:18135594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g007978m.g 0.5kb upstream 0.5kb upstream 8526 true scaffold00506: 67425-75950 Citrus sinensis
orange1.1g007978m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00506: 75451-75950 Citrus sinensis
orange1.1g007978m.g 0.5kb downstream 0.5kb downstream 8526 true scaffold00506: 66925-75450 Citrus sinensis
orange1.1g007978m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00506: 66925-67424 Citrus sinensis
orange1.1g007978m.g 1.0kb upstream 1.0kb upstream 9026 true scaffold00506: 67425-76450 Citrus sinensis
orange1.1g007978m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00506: 75451-76450 Citrus sinensis
orange1.1g007978m.g 1.0kb downstream 1.0kb downstream 9026 true scaffold00506: 66425-75450 Citrus sinensis
orange1.1g007978m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00506: 66425-67424 Citrus sinensis
orange1.1g007978m.g 2.0kb upstream 2.0kb upstream 10026 true scaffold00506: 67425-77450 Citrus sinensis
orange1.1g007978m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00506: 75451-77450 Citrus sinensis
orange1.1g007978m.g 2.0kb downstream 2.0kb downstream 10026 true scaffold00506: 65425-75450 Citrus sinensis
orange1.1g007978m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00506: 65425-67424 Citrus sinensis
orange1.1g007978m.g 5.0kb upstream 5.0kb upstream 13026 true scaffold00506: 67425-80450 Citrus sinensis
orange1.1g007978m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00506: 75451-80450 Citrus sinensis
orange1.1g007978m.g 5.0kb downstream 5.0kb downstream 13026 true scaffold00506: 62425-75450 Citrus sinensis
orange1.1g007978m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00506: 62425-67424 Citrus sinensis
orange1.1g007978m.g 10.0kb upstream 10.0kb upstream 18026 true scaffold00506: 67425-85450 Citrus sinensis
orange1.1g007978m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00506: 75451-85450 Citrus sinensis
orange1.1g007978m.g 10.0kb downstream 10.0kb downstream 18026 true scaffold00506: 57425-75450 Citrus sinensis
orange1.1g007978m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00506: 57425-67424 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530977 5273 Angiosperm Singleton cluster - no MSA
124330587 5266 SBM Singleton cluster - no MSA
124175836 5268 Malvidae Singleton cluster - no MSA
123898370 5270 Rosid Singleton cluster - no MSA
123480227 5271 Pentapetalae Singleton cluster - no MSA
122515479 5272 Eudicot Singleton cluster - no MSA
120803739 5274 Embryophyte Singleton cluster - no MSA
122845293 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain