Gene : orange1.1g013928m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  505
Name:  ? orange1.1g013928m.g Secondary Identifier:  ? PAC:18135972
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5173 Citrus sinensis pathologic  
Csinensis PWY-5464 Citrus sinensis pathologic  
Csinensis PYRUVDEHYD-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g013928m.g 0.5kb upstream 0.5kb upstream 3656 true scaffold00001: 3374445-3378100 Citrus sinensis
orange1.1g013928m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 3374445-3374944 Citrus sinensis
orange1.1g013928m.g 0.5kb downstream 0.5kb downstream 3656 true scaffold00001: 3374945-3378600 Citrus sinensis
orange1.1g013928m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 3378101-3378600 Citrus sinensis
orange1.1g013928m.g 1.0kb upstream 1.0kb upstream 4156 true scaffold00001: 3373945-3378100 Citrus sinensis
orange1.1g013928m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 3373945-3374944 Citrus sinensis
orange1.1g013928m.g 1.0kb downstream 1.0kb downstream 4156 true scaffold00001: 3374945-3379100 Citrus sinensis
orange1.1g013928m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 3378101-3379100 Citrus sinensis
orange1.1g013928m.g 2.0kb upstream 2.0kb upstream 5156 true scaffold00001: 3372945-3378100 Citrus sinensis
orange1.1g013928m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 3372945-3374944 Citrus sinensis
orange1.1g013928m.g 2.0kb downstream 2.0kb downstream 5156 true scaffold00001: 3374945-3380100 Citrus sinensis
orange1.1g013928m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 3378101-3380100 Citrus sinensis
orange1.1g013928m.g 5.0kb upstream 5.0kb upstream 8156 true scaffold00001: 3369945-3378100 Citrus sinensis
orange1.1g013928m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 3369945-3374944 Citrus sinensis
orange1.1g013928m.g 5.0kb downstream 5.0kb downstream 8156 true scaffold00001: 3374945-3383100 Citrus sinensis
orange1.1g013928m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 3378101-3383100 Citrus sinensis
orange1.1g013928m.g 10.0kb upstream 10.0kb upstream 13156 true scaffold00001: 3364945-3378100 Citrus sinensis
orange1.1g013928m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 3364945-3374944 Citrus sinensis
orange1.1g013928m.g 10.0kb downstream 10.0kb downstream 13156 true scaffold00001: 3374945-3388100 Citrus sinensis
orange1.1g013928m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 3378101-3388100 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343284 5266 SBM View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain