Gene : orange1.1g010398m.g C. sinensis v1.1
Defline:  (1 of 4) 6.1.1.15 - Proline--tRNA ligase / Prolyl-tRNA synthetase Genomic Order:  575
Name:  ? orange1.1g010398m.g Secondary Identifier:  ? PAC:18137303
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g010398m.g 0.5kb upstream 0.5kb upstream 6695 true scaffold00001: 3835614-3842308 Citrus sinensis
orange1.1g010398m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 3841809-3842308 Citrus sinensis
orange1.1g010398m.g 0.5kb downstream 0.5kb downstream 6695 true scaffold00001: 3835114-3841808 Citrus sinensis
orange1.1g010398m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 3835114-3835613 Citrus sinensis
orange1.1g010398m.g 1.0kb upstream 1.0kb upstream 7195 true scaffold00001: 3835614-3842808 Citrus sinensis
orange1.1g010398m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 3841809-3842808 Citrus sinensis
orange1.1g010398m.g 1.0kb downstream 1.0kb downstream 7195 true scaffold00001: 3834614-3841808 Citrus sinensis
orange1.1g010398m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 3834614-3835613 Citrus sinensis
orange1.1g010398m.g 2.0kb upstream 2.0kb upstream 8195 true scaffold00001: 3835614-3843808 Citrus sinensis
orange1.1g010398m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 3841809-3843808 Citrus sinensis
orange1.1g010398m.g 2.0kb downstream 2.0kb downstream 8195 true scaffold00001: 3833614-3841808 Citrus sinensis
orange1.1g010398m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 3833614-3835613 Citrus sinensis
orange1.1g010398m.g 5.0kb upstream 5.0kb upstream 11195 true scaffold00001: 3835614-3846808 Citrus sinensis
orange1.1g010398m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 3841809-3846808 Citrus sinensis
orange1.1g010398m.g 5.0kb downstream 5.0kb downstream 11195 true scaffold00001: 3830614-3841808 Citrus sinensis
orange1.1g010398m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 3830614-3835613 Citrus sinensis
orange1.1g010398m.g 10.0kb upstream 10.0kb upstream 16195 true scaffold00001: 3835614-3851808 Citrus sinensis
orange1.1g010398m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 3841809-3851808 Citrus sinensis
orange1.1g010398m.g 10.0kb downstream 10.0kb downstream 16195 true scaffold00001: 3825614-3841808 Citrus sinensis
orange1.1g010398m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 3825614-3835613 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348511 5266 SBM View MSA
124247467 5268 Malvidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain