Gene : orange1.1g025493m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR12780 - RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED Genomic Order:  176
Name:  ? orange1.1g025493m.g Secondary Identifier:  ? PAC:18096401
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025493m.g 0.5kb upstream 0.5kb upstream 5699 true scaffold00005: 1463072-1468770 Citrus sinensis
orange1.1g025493m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00005: 1468271-1468770 Citrus sinensis
orange1.1g025493m.g 0.5kb downstream 0.5kb downstream 5699 true scaffold00005: 1462572-1468270 Citrus sinensis
orange1.1g025493m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00005: 1462572-1463071 Citrus sinensis
orange1.1g025493m.g 1.0kb upstream 1.0kb upstream 6199 true scaffold00005: 1463072-1469270 Citrus sinensis
orange1.1g025493m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00005: 1468271-1469270 Citrus sinensis
orange1.1g025493m.g 1.0kb downstream 1.0kb downstream 6199 true scaffold00005: 1462072-1468270 Citrus sinensis
orange1.1g025493m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00005: 1462072-1463071 Citrus sinensis
orange1.1g025493m.g 2.0kb upstream 2.0kb upstream 7199 true scaffold00005: 1463072-1470270 Citrus sinensis
orange1.1g025493m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00005: 1468271-1470270 Citrus sinensis
orange1.1g025493m.g 2.0kb downstream 2.0kb downstream 7199 true scaffold00005: 1461072-1468270 Citrus sinensis
orange1.1g025493m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00005: 1461072-1463071 Citrus sinensis
orange1.1g025493m.g 5.0kb upstream 5.0kb upstream 10199 true scaffold00005: 1463072-1473270 Citrus sinensis
orange1.1g025493m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00005: 1468271-1473270 Citrus sinensis
orange1.1g025493m.g 5.0kb downstream 5.0kb downstream 10199 true scaffold00005: 1458072-1468270 Citrus sinensis
orange1.1g025493m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00005: 1458072-1463071 Citrus sinensis
orange1.1g025493m.g 10.0kb upstream 10.0kb upstream 15199 true scaffold00005: 1463072-1478270 Citrus sinensis
orange1.1g025493m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00005: 1468271-1478270 Citrus sinensis
orange1.1g025493m.g 10.0kb downstream 10.0kb downstream 15199 true scaffold00005: 1453072-1468270 Citrus sinensis
orange1.1g025493m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00005: 1453072-1463071 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121527826 5273 Angiosperm Singleton cluster - no MSA
124327414 5266 SBM Singleton cluster - no MSA
124172676 5268 Malvidae Singleton cluster - no MSA
123895214 5270 Rosid Singleton cluster - no MSA
123477073 5271 Pentapetalae Singleton cluster - no MSA
122512325 5272 Eudicot Singleton cluster - no MSA
120800588 5274 Embryophyte Singleton cluster - no MSA
122842142 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain