Gene : orange1.1g039053m.g C. sinensis v1.1
Defline:  (1 of 4) PF06830 - Root cap (Root_cap) Genomic Order:  206
Name:  ? orange1.1g039053m.g Secondary Identifier:  ? PAC:18097385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039053m.g 0.5kb upstream 0.5kb upstream 1974 true scaffold00014: 1496913-1498886 Citrus sinensis
orange1.1g039053m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00014: 1498387-1498886 Citrus sinensis
orange1.1g039053m.g 0.5kb downstream 0.5kb downstream 1974 true scaffold00014: 1496413-1498386 Citrus sinensis
orange1.1g039053m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00014: 1496413-1496912 Citrus sinensis
orange1.1g039053m.g 1.0kb upstream 1.0kb upstream 2474 true scaffold00014: 1496913-1499386 Citrus sinensis
orange1.1g039053m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00014: 1498387-1499386 Citrus sinensis
orange1.1g039053m.g 1.0kb downstream 1.0kb downstream 2474 true scaffold00014: 1495913-1498386 Citrus sinensis
orange1.1g039053m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00014: 1495913-1496912 Citrus sinensis
orange1.1g039053m.g 2.0kb upstream 2.0kb upstream 3474 true scaffold00014: 1496913-1500386 Citrus sinensis
orange1.1g039053m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00014: 1498387-1500386 Citrus sinensis
orange1.1g039053m.g 2.0kb downstream 2.0kb downstream 3474 true scaffold00014: 1494913-1498386 Citrus sinensis
orange1.1g039053m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00014: 1494913-1496912 Citrus sinensis
orange1.1g039053m.g 5.0kb upstream 5.0kb upstream 6474 true scaffold00014: 1496913-1503386 Citrus sinensis
orange1.1g039053m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00014: 1498387-1503386 Citrus sinensis
orange1.1g039053m.g 5.0kb downstream 5.0kb downstream 6474 true scaffold00014: 1491913-1498386 Citrus sinensis
orange1.1g039053m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00014: 1491913-1496912 Citrus sinensis
orange1.1g039053m.g 10.0kb upstream 10.0kb upstream 11474 true scaffold00014: 1496913-1508386 Citrus sinensis
orange1.1g039053m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00014: 1498387-1508386 Citrus sinensis
orange1.1g039053m.g 10.0kb downstream 10.0kb downstream 11474 true scaffold00014: 1486913-1498386 Citrus sinensis
orange1.1g039053m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00014: 1486913-1496912 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343378 5266 SBM View MSA
124246752 5268 Malvidae View MSA
124061597 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain