Gene : orange1.1g019539m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  14
Name:  ? orange1.1g019539m.g Secondary Identifier:  ? PAC:18115535
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g019539m.g 0.5kb upstream 0.5kb upstream 3696 true scaffold00127: 298249-301944 Citrus sinensis
orange1.1g019539m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00127: 298249-298748 Citrus sinensis
orange1.1g019539m.g 0.5kb downstream 0.5kb downstream 3696 true scaffold00127: 298749-302444 Citrus sinensis
orange1.1g019539m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00127: 301945-302444 Citrus sinensis
orange1.1g019539m.g 1.0kb upstream 1.0kb upstream 4196 true scaffold00127: 297749-301944 Citrus sinensis
orange1.1g019539m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00127: 297749-298748 Citrus sinensis
orange1.1g019539m.g 1.0kb downstream 1.0kb downstream 4196 true scaffold00127: 298749-302944 Citrus sinensis
orange1.1g019539m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00127: 301945-302944 Citrus sinensis
orange1.1g019539m.g 2.0kb upstream 2.0kb upstream 5196 true scaffold00127: 296749-301944 Citrus sinensis
orange1.1g019539m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00127: 296749-298748 Citrus sinensis
orange1.1g019539m.g 2.0kb downstream 2.0kb downstream 5196 true scaffold00127: 298749-303944 Citrus sinensis
orange1.1g019539m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00127: 301945-303944 Citrus sinensis
orange1.1g019539m.g 5.0kb upstream 5.0kb upstream 8196 true scaffold00127: 293749-301944 Citrus sinensis
orange1.1g019539m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00127: 293749-298748 Citrus sinensis
orange1.1g019539m.g 5.0kb downstream 5.0kb downstream 8196 true scaffold00127: 298749-306944 Citrus sinensis
orange1.1g019539m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00127: 301945-306944 Citrus sinensis
orange1.1g019539m.g 10.0kb upstream 10.0kb upstream 13196 true scaffold00127: 288749-301944 Citrus sinensis
orange1.1g019539m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00127: 288749-298748 Citrus sinensis
orange1.1g019539m.g 10.0kb downstream 10.0kb downstream 13196 true scaffold00127: 298749-311944 Citrus sinensis
orange1.1g019539m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00127: 301945-311944 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341271 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain