Protein Family : Protein with RING/U-box and TRAF-like domains 124251160

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  46

46 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29742.t000047 (1 of 7) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) R. communis v0.1 2689   29742: 309370-312058
29742.t000049 (1 of 7) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) R. communis v0.1 2534   29742: 314653-317186
30024.t000029 (1 of 7) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) R. communis v0.1 4039   30024: 582179-586217
orange1.1g020592m.g (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. sinensis v1.1 3345   scaffold00001: 2858135-2861479
orange1.1g019539m.g (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. sinensis v1.1 3196   scaffold00127: 298749-301944
AT3G61790 (1 of 3) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED A. thaliana TAIR10 1996   Chr3: 22871791-22873786
AT4G27880 (1 of 3) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED A. thaliana TAIR10 1830   Chr4: 13883223-13885052
Thhalv10025710m.g (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED E. salsugineum v1.0 1733   scaffold_1: 5238804-5240536
Thhalv10006100m.g (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED E. salsugineum v1.0 2295   scaffold_19: 588965-591259
Ciclev10021159m.g (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. clementina v1.0 3766   scaffold_3: 48103777-48107542
Ciclev10020998m.g (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. clementina v1.0 3356   scaffold_3: 11479702-11483057
Lus10022405.g (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED L. usitatissimum v1.0 2041   scaffold38: 344415-346455
Lus10018110.g (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED L. usitatissimum v1.0 1917   scaffold112: 135763-137679
Gorai.004G114600 (1 of 7) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED G. raimondii v2.1 2805   Chr04: 26952113-26954917
Gorai.008G125600 (1 of 7) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED G. raimondii v2.1 5450   Chr08: 36515167-36520616
Gorai.007G108500 (1 of 7) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED G. raimondii v2.1 3437   Chr07: 8190907-8194343
Thecc1EG005142 (1 of 3) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED T. cacao v1.1 4133   scaffold_1: 35267806-35271938
Thecc1EG015414 (1 of 3) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED T. cacao v1.1 2936   scaffold_3: 27834041-27836976
Araha.4474s0002 (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED A. halleri v1.1 1010   Scaffold4474: 5360-6369
Araha.7206s0012 (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED A. halleri v1.1 2144   Scaffold7206: 62502-64645
Cagra.0483s0066 (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. grandiflora v1.1 2298   Scaffold483: 237472-239769
Cagra.1225s0109 (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED C. grandiflora v1.1 1797   Scaffold1225: 384813-386609
Brara.A01764 (1 of 11) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED B. rapa FPsc v1.3 1694   A01: 9943207-9944900
Brara.G01944 (1 of 11) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED B. rapa FPsc v1.3 2132   A07: 17773720-17775851
Bostr.7867s0619 (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED B. stricta v1.2 1921   Scaffold7867: 3047136-3049056
Bostr.13158s0182 (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED B. stricta v1.2 2905   Scaffold13158: 848230-851134
SapurV1A.0174s0050 (1 of 11) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) S. purpurea v1.0 3178   chr12: 730102-733279
SapurV1A.0013s0320 (1 of 11) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) S. purpurea v1.0 3066   chr14: 7387235-7390300
SapurV1A.0524s0150 (1 of 11) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) S. purpurea v1.0 3406   chr15: 2183471-2186876
SapurV1A.0190s0290 (1 of 11) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) S. purpurea v1.0 3362   chr02: 16355373-16358734

46 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g019539m C. sinensis v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
AT3G61790.1 A. thaliana TAIR10 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Lus10018110 L. usitatissimum v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Gorai.008G125600.1 G. raimondii v2.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
Cagra.0483s0066.1.p C. grandiflora v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Brara.G01944.1.p B. rapa FPsc v1.3 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
SapurV1A.0524s0150.1.p S. purpurea v1.0 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
Manes.05G022600.1.p M. esculenta v6.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
Manes.01G246000.1.p M. esculenta v6.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
Manes.01G246100.1.p M. esculenta v6.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
AL5G44350.t1 A. lyrata v2.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
AL7G24750.t1 A. lyrata v2.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Potri.012G015500.1.p P. trichocarpa v3.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
Podel.14G101100.1.p P. deltoides WV94 v2.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
Podel.15G013200.1.p P. deltoides WV94 v2.1 124251160 Protein with RING/U-box and TRAF-like domains 4 5268 Malvidae
29742.m001413 R. communis v0.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
29742.m001411 R. communis v0.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
30024.m001712 R. communis v0.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
orange1.1g020592m C. sinensis v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
AT4G27880.1 A. thaliana TAIR10 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Thhalv10006100m E. salsugineum v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Thhalv10025710m E. salsugineum v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Ciclev10020998m C. clementina v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Ciclev10021159m C. clementina v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Lus10022405 L. usitatissimum v1.0 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Gorai.007G108500.1 G. raimondii v2.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
Gorai.004G114600.1 G. raimondii v2.1 124251160 Protein with RING/U-box and TRAF-like domains 3 5268 Malvidae
Thecc1EG005142t1 T. cacao v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Thecc1EG015414t1 T. cacao v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae
Araha.4474s0002.1.p A. halleri v1.1 124251160 Protein with RING/U-box and TRAF-like domains 2 5268 Malvidae