Gene : Ciclev10020998m.g C. clementina v1.0
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  1323
Name:  ? Ciclev10020998m.g Secondary Identifier:  ? PAC:20809990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10020998m.g 0.5kb upstream 0.5kb upstream 3856 true scaffold_3: 11479702-11483557 Citrus clementina
Ciclev10020998m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11483058-11483557 Citrus clementina
Ciclev10020998m.g 0.5kb downstream 0.5kb downstream 3856 true scaffold_3: 11479202-11483057 Citrus clementina
Ciclev10020998m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11479202-11479701 Citrus clementina
Ciclev10020998m.g 1.0kb upstream 1.0kb upstream 4356 true scaffold_3: 11479702-11484057 Citrus clementina
Ciclev10020998m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11483058-11484057 Citrus clementina
Ciclev10020998m.g 1.0kb downstream 1.0kb downstream 4356 true scaffold_3: 11478702-11483057 Citrus clementina
Ciclev10020998m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11478702-11479701 Citrus clementina
Ciclev10020998m.g 2.0kb upstream 2.0kb upstream 5356 true scaffold_3: 11479702-11485057 Citrus clementina
Ciclev10020998m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11483058-11485057 Citrus clementina
Ciclev10020998m.g 2.0kb downstream 2.0kb downstream 5356 true scaffold_3: 11477702-11483057 Citrus clementina
Ciclev10020998m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11477702-11479701 Citrus clementina
Ciclev10020998m.g 5.0kb upstream 5.0kb upstream 8356 true scaffold_3: 11479702-11488057 Citrus clementina
Ciclev10020998m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11483058-11488057 Citrus clementina
Ciclev10020998m.g 5.0kb downstream 5.0kb downstream 8356 true scaffold_3: 11474702-11483057 Citrus clementina
Ciclev10020998m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11474702-11479701 Citrus clementina
Ciclev10020998m.g 10.0kb upstream 10.0kb upstream 13356 true scaffold_3: 11479702-11493057 Citrus clementina
Ciclev10020998m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11483058-11493057 Citrus clementina
Ciclev10020998m.g 10.0kb downstream 10.0kb downstream 13356 true scaffold_3: 11469702-11483057 Citrus clementina
Ciclev10020998m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11469702-11479701 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341271 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain