Gene : Ciclev10021159m.g C. clementina v1.0
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  4055
Name:  ? Ciclev10021159m.g Secondary Identifier:  ? PAC:20807429
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10021159m.g 0.5kb upstream 0.5kb upstream 4266 true scaffold_3: 48103277-48107542 Citrus clementina
Ciclev10021159m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 48103277-48103776 Citrus clementina
Ciclev10021159m.g 0.5kb downstream 0.5kb downstream 4266 true scaffold_3: 48103777-48108042 Citrus clementina
Ciclev10021159m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 48107543-48108042 Citrus clementina
Ciclev10021159m.g 1.0kb upstream 1.0kb upstream 4766 true scaffold_3: 48102777-48107542 Citrus clementina
Ciclev10021159m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 48102777-48103776 Citrus clementina
Ciclev10021159m.g 1.0kb downstream 1.0kb downstream 4766 true scaffold_3: 48103777-48108542 Citrus clementina
Ciclev10021159m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 48107543-48108542 Citrus clementina
Ciclev10021159m.g 2.0kb upstream 2.0kb upstream 5766 true scaffold_3: 48101777-48107542 Citrus clementina
Ciclev10021159m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 48101777-48103776 Citrus clementina
Ciclev10021159m.g 2.0kb downstream 2.0kb downstream 5766 true scaffold_3: 48103777-48109542 Citrus clementina
Ciclev10021159m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 48107543-48109542 Citrus clementina
Ciclev10021159m.g 5.0kb upstream 5.0kb upstream 8766 true scaffold_3: 48098777-48107542 Citrus clementina
Ciclev10021159m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 48098777-48103776 Citrus clementina
Ciclev10021159m.g 5.0kb downstream 5.0kb downstream 8766 true scaffold_3: 48103777-48112542 Citrus clementina
Ciclev10021159m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 48107543-48112542 Citrus clementina
Ciclev10021159m.g 10.0kb upstream 10.0kb upstream 13766 true scaffold_3: 48093777-48107542 Citrus clementina
Ciclev10021159m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 48093777-48103776 Citrus clementina
Ciclev10021159m.g 10.0kb downstream 10.0kb downstream 13766 true scaffold_3: 48103777-48117542 Citrus clementina
Ciclev10021159m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 48107543-48117542 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338508 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain