Gene : SapurV1A.0174s0050 S. purpurea v1.0
Defline:  (1 of 11) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Genomic Order:  95
Name:  ? SapurV1A.0174s0050 Secondary Identifier:  ? PAC:31442651
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7511 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0174s0050 0.5kb upstream 0.5kb upstream 3678 true chr12: 729602-733279 Salix purpurea
SapurV1A.0174s0050 0.5kb upstream 0.5kb upstream 500 false chr12: 729602-730101 Salix purpurea
SapurV1A.0174s0050 0.5kb downstream 0.5kb downstream 3678 true chr12: 730102-733779 Salix purpurea
SapurV1A.0174s0050 0.5kb downstream 0.5kb downstream 500 false chr12: 733280-733779 Salix purpurea
SapurV1A.0174s0050 1.0kb upstream 1.0kb upstream 4178 true chr12: 729102-733279 Salix purpurea
SapurV1A.0174s0050 1.0kb upstream 1.0kb upstream 1000 false chr12: 729102-730101 Salix purpurea
SapurV1A.0174s0050 1.0kb downstream 1.0kb downstream 4178 true chr12: 730102-734279 Salix purpurea
SapurV1A.0174s0050 1.0kb downstream 1.0kb downstream 1000 false chr12: 733280-734279 Salix purpurea
SapurV1A.0174s0050 2.0kb upstream 2.0kb upstream 5178 true chr12: 728102-733279 Salix purpurea
SapurV1A.0174s0050 2.0kb upstream 2.0kb upstream 2000 false chr12: 728102-730101 Salix purpurea
SapurV1A.0174s0050 2.0kb downstream 2.0kb downstream 5178 true chr12: 730102-735279 Salix purpurea
SapurV1A.0174s0050 2.0kb downstream 2.0kb downstream 2000 false chr12: 733280-735279 Salix purpurea
SapurV1A.0174s0050 5.0kb upstream 5.0kb upstream 8178 true chr12: 725102-733279 Salix purpurea
SapurV1A.0174s0050 5.0kb upstream 5.0kb upstream 5000 false chr12: 725102-730101 Salix purpurea
SapurV1A.0174s0050 5.0kb downstream 5.0kb downstream 8178 true chr12: 730102-738279 Salix purpurea
SapurV1A.0174s0050 5.0kb downstream 5.0kb downstream 5000 false chr12: 733280-738279 Salix purpurea
SapurV1A.0174s0050 10.0kb upstream 10.0kb upstream 13178 true chr12: 720102-733279 Salix purpurea
SapurV1A.0174s0050 10.0kb upstream 10.0kb upstream 10000 false chr12: 720102-730101 Salix purpurea
SapurV1A.0174s0050 10.0kb downstream 10.0kb downstream 13178 true chr12: 730102-743279 Salix purpurea
SapurV1A.0174s0050 10.0kb downstream 10.0kb downstream 10000 false chr12: 733280-743279 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425893 5262 Malpighiales View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain