Gene : 29742.t000047 R. communis v0.1
Defline:  (1 of 7) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Genomic Order:  47
Name:  ? 29742.t000047 Secondary Identifier:  ? PAC:16807642
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-7511 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29742.t000047 0.5kb upstream 0.5kb upstream 3189 true 29742: 308870-312058 Ricinus communis
29742.t000047 0.5kb upstream 0.5kb upstream 500 false 29742: 308870-309369 Ricinus communis
29742.t000047 0.5kb downstream 0.5kb downstream 3189 true 29742: 309370-312558 Ricinus communis
29742.t000047 0.5kb downstream 0.5kb downstream 500 false 29742: 312059-312558 Ricinus communis
29742.t000047 1.0kb upstream 1.0kb upstream 3689 true 29742: 308370-312058 Ricinus communis
29742.t000047 1.0kb upstream 1.0kb upstream 1000 false 29742: 308370-309369 Ricinus communis
29742.t000047 1.0kb downstream 1.0kb downstream 3689 true 29742: 309370-313058 Ricinus communis
29742.t000047 1.0kb downstream 1.0kb downstream 1000 false 29742: 312059-313058 Ricinus communis
29742.t000047 2.0kb upstream 2.0kb upstream 4689 true 29742: 307370-312058 Ricinus communis
29742.t000047 2.0kb upstream 2.0kb upstream 2000 false 29742: 307370-309369 Ricinus communis
29742.t000047 2.0kb downstream 2.0kb downstream 4689 true 29742: 309370-314058 Ricinus communis
29742.t000047 2.0kb downstream 2.0kb downstream 2000 false 29742: 312059-314058 Ricinus communis
29742.t000047 5.0kb upstream 5.0kb upstream 7689 true 29742: 304370-312058 Ricinus communis
29742.t000047 5.0kb upstream 5.0kb upstream 5000 false 29742: 304370-309369 Ricinus communis
29742.t000047 5.0kb downstream 5.0kb downstream 7689 true 29742: 309370-317058 Ricinus communis
29742.t000047 5.0kb downstream 5.0kb downstream 5000 false 29742: 312059-317058 Ricinus communis
29742.t000047 10.0kb upstream 10.0kb upstream 12689 true 29742: 299370-312058 Ricinus communis
29742.t000047 10.0kb upstream 10.0kb upstream 10000 false 29742: 299370-309369 Ricinus communis
29742.t000047 10.0kb downstream 10.0kb downstream 12689 true 29742: 309370-322058 Ricinus communis
29742.t000047 10.0kb downstream 10.0kb downstream 10000 false 29742: 312059-322058 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464336 5262 Malpighiales View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain