Gene : Gorai.007G108500 G. raimondii v2.1
Defline:  (1 of 7) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  1085
Name:  ? Gorai.007G108500 Secondary Identifier:  ? PAC:26782561
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G108500 0.5kb upstream 0.5kb upstream 3937 true Chr07: 8190907-8194843 Gossypium raimondii
Gorai.007G108500 0.5kb upstream 0.5kb upstream 500 false Chr07: 8194344-8194843 Gossypium raimondii
Gorai.007G108500 0.5kb downstream 0.5kb downstream 3937 true Chr07: 8190407-8194343 Gossypium raimondii
Gorai.007G108500 0.5kb downstream 0.5kb downstream 500 false Chr07: 8190407-8190906 Gossypium raimondii
Gorai.007G108500 1.0kb upstream 1.0kb upstream 4437 true Chr07: 8190907-8195343 Gossypium raimondii
Gorai.007G108500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8194344-8195343 Gossypium raimondii
Gorai.007G108500 1.0kb downstream 1.0kb downstream 4437 true Chr07: 8189907-8194343 Gossypium raimondii
Gorai.007G108500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8189907-8190906 Gossypium raimondii
Gorai.007G108500 2.0kb upstream 2.0kb upstream 5437 true Chr07: 8190907-8196343 Gossypium raimondii
Gorai.007G108500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8194344-8196343 Gossypium raimondii
Gorai.007G108500 2.0kb downstream 2.0kb downstream 5437 true Chr07: 8188907-8194343 Gossypium raimondii
Gorai.007G108500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8188907-8190906 Gossypium raimondii
Gorai.007G108500 5.0kb upstream 5.0kb upstream 8437 true Chr07: 8190907-8199343 Gossypium raimondii
Gorai.007G108500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8194344-8199343 Gossypium raimondii
Gorai.007G108500 5.0kb downstream 5.0kb downstream 8437 true Chr07: 8185907-8194343 Gossypium raimondii
Gorai.007G108500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8185907-8190906 Gossypium raimondii
Gorai.007G108500 10.0kb upstream 10.0kb upstream 13437 true Chr07: 8190907-8204343 Gossypium raimondii
Gorai.007G108500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8194344-8204343 Gossypium raimondii
Gorai.007G108500 10.0kb downstream 10.0kb downstream 13437 true Chr07: 8180907-8194343 Gossypium raimondii
Gorai.007G108500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8180907-8190906 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836007 5264 Brassicales-Malvales View MSA
124338508 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain