Gene : Araha.4474s0002 A. halleri v1.1
Defline:  (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  2
Name:  ? Araha.4474s0002 Secondary Identifier:  ? PAC:28841688
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4474s0002 0.5kb upstream 0.5kb upstream 1510 true Scaffold4474: 4860-6369 Arabidopsis halleri
Araha.4474s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4474: 4860-5359 Arabidopsis halleri
Araha.4474s0002 0.5kb downstream 0.5kb downstream 1510 true Scaffold4474: 5360-6869 Arabidopsis halleri
Araha.4474s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4474: 6370-6869 Arabidopsis halleri
Araha.4474s0002 1.0kb upstream 1.0kb upstream 2010 true Scaffold4474: 4360-6369 Arabidopsis halleri
Araha.4474s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4474: 4360-5359 Arabidopsis halleri
Araha.4474s0002 1.0kb downstream 1.0kb downstream 2010 true Scaffold4474: 5360-7369 Arabidopsis halleri
Araha.4474s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4474: 6370-7369 Arabidopsis halleri
Araha.4474s0002 2.0kb upstream 2.0kb upstream 3010 true Scaffold4474: 3360-6369 Arabidopsis halleri
Araha.4474s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4474: 3360-5359 Arabidopsis halleri
Araha.4474s0002 2.0kb downstream 2.0kb downstream 3010 true Scaffold4474: 5360-8369 Arabidopsis halleri
Araha.4474s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4474: 6370-8369 Arabidopsis halleri
Araha.4474s0002 5.0kb upstream 5.0kb upstream 6010 true Scaffold4474: 360-6369 Arabidopsis halleri
Araha.4474s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4474: 360-5359 Arabidopsis halleri
Araha.4474s0002 5.0kb downstream 5.0kb downstream 6010 true Scaffold4474: 5360-11369 Arabidopsis halleri
Araha.4474s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4474: 6370-11369 Arabidopsis halleri
Araha.4474s0002 10.0kb upstream 10.0kb upstream 6369 true Scaffold4474: 1-6369 Arabidopsis halleri
Araha.4474s0002 10.0kb upstream 10.0kb upstream 5359 false Scaffold4474: 1-5359 Arabidopsis halleri
Araha.4474s0002 10.0kb downstream 10.0kb downstream 11010 true Scaffold4474: 5360-16369 Arabidopsis halleri
Araha.4474s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4474: 6370-16369 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369090 5261 Brassicaceae View MSA
123832922 5264 Brassicales-Malvales View MSA
124341271 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain