Gene : Bostr.7867s0619 B. stricta v1.2
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  619
Name:  ? Bostr.7867s0619 Secondary Identifier:  ? PAC:30658481
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0619 0.5kb upstream 0.5kb upstream 2421 true Scaffold7867: 3046636-3049056 Boechera stricta
Bostr.7867s0619 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 3046636-3047135 Boechera stricta
Bostr.7867s0619 0.5kb downstream 0.5kb downstream 2421 true Scaffold7867: 3047136-3049556 Boechera stricta
Bostr.7867s0619 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 3049057-3049556 Boechera stricta
Bostr.7867s0619 1.0kb upstream 1.0kb upstream 2921 true Scaffold7867: 3046136-3049056 Boechera stricta
Bostr.7867s0619 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 3046136-3047135 Boechera stricta
Bostr.7867s0619 1.0kb downstream 1.0kb downstream 2921 true Scaffold7867: 3047136-3050056 Boechera stricta
Bostr.7867s0619 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 3049057-3050056 Boechera stricta
Bostr.7867s0619 2.0kb upstream 2.0kb upstream 3921 true Scaffold7867: 3045136-3049056 Boechera stricta
Bostr.7867s0619 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 3045136-3047135 Boechera stricta
Bostr.7867s0619 2.0kb downstream 2.0kb downstream 3921 true Scaffold7867: 3047136-3051056 Boechera stricta
Bostr.7867s0619 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 3049057-3051056 Boechera stricta
Bostr.7867s0619 5.0kb upstream 5.0kb upstream 6921 true Scaffold7867: 3042136-3049056 Boechera stricta
Bostr.7867s0619 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 3042136-3047135 Boechera stricta
Bostr.7867s0619 5.0kb downstream 5.0kb downstream 6921 true Scaffold7867: 3047136-3054056 Boechera stricta
Bostr.7867s0619 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 3049057-3054056 Boechera stricta
Bostr.7867s0619 10.0kb upstream 10.0kb upstream 11921 true Scaffold7867: 3037136-3049056 Boechera stricta
Bostr.7867s0619 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 3037136-3047135 Boechera stricta
Bostr.7867s0619 10.0kb downstream 10.0kb downstream 11921 true Scaffold7867: 3047136-3059056 Boechera stricta
Bostr.7867s0619 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 3049057-3059056 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369090 5261 Brassicaceae View MSA
123832922 5264 Brassicales-Malvales View MSA
124341271 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain