Gene : Lus10022405.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  54
Name:  ? Lus10022405.g Secondary Identifier:  ? PAC:23171756
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10022405.g 0.5kb upstream 0.5kb upstream 2541 true scaffold38: 343915-346455 Linum usitatissimum
Lus10022405.g 0.5kb upstream 0.5kb upstream 500 false scaffold38: 343915-344414 Linum usitatissimum
Lus10022405.g 0.5kb downstream 0.5kb downstream 2541 true scaffold38: 344415-346955 Linum usitatissimum
Lus10022405.g 0.5kb downstream 0.5kb downstream 500 false scaffold38: 346456-346955 Linum usitatissimum
Lus10022405.g 1.0kb upstream 1.0kb upstream 3041 true scaffold38: 343415-346455 Linum usitatissimum
Lus10022405.g 1.0kb upstream 1.0kb upstream 1000 false scaffold38: 343415-344414 Linum usitatissimum
Lus10022405.g 1.0kb downstream 1.0kb downstream 3041 true scaffold38: 344415-347455 Linum usitatissimum
Lus10022405.g 1.0kb downstream 1.0kb downstream 1000 false scaffold38: 346456-347455 Linum usitatissimum
Lus10022405.g 2.0kb upstream 2.0kb upstream 4041 true scaffold38: 342415-346455 Linum usitatissimum
Lus10022405.g 2.0kb upstream 2.0kb upstream 2000 false scaffold38: 342415-344414 Linum usitatissimum
Lus10022405.g 2.0kb downstream 2.0kb downstream 4041 true scaffold38: 344415-348455 Linum usitatissimum
Lus10022405.g 2.0kb downstream 2.0kb downstream 2000 false scaffold38: 346456-348455 Linum usitatissimum
Lus10022405.g 5.0kb upstream 5.0kb upstream 7041 true scaffold38: 339415-346455 Linum usitatissimum
Lus10022405.g 5.0kb upstream 5.0kb upstream 5000 false scaffold38: 339415-344414 Linum usitatissimum
Lus10022405.g 5.0kb downstream 5.0kb downstream 7041 true scaffold38: 344415-351455 Linum usitatissimum
Lus10022405.g 5.0kb downstream 5.0kb downstream 5000 false scaffold38: 346456-351455 Linum usitatissimum
Lus10022405.g 10.0kb upstream 10.0kb upstream 12041 true scaffold38: 334415-346455 Linum usitatissimum
Lus10022405.g 10.0kb upstream 10.0kb upstream 10000 false scaffold38: 334415-344414 Linum usitatissimum
Lus10022405.g 10.0kb downstream 10.0kb downstream 12041 true scaffold38: 344415-356455 Linum usitatissimum
Lus10022405.g 10.0kb downstream 10.0kb downstream 10000 false scaffold38: 346456-356455 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425893 5262 Malpighiales View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain