Gene : AT3G61790 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  5250
Name:  ? AT3G61790 Secondary Identifier:  ? PAC:19661261
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61790 0.5kb upstream 0.5kb upstream 2496 true Chr3: 22871791-22874286 Arabidopsis thaliana
AT3G61790 0.5kb upstream 0.5kb upstream 500 false Chr3: 22873787-22874286 Arabidopsis thaliana
AT3G61790 0.5kb downstream 0.5kb downstream 2496 true Chr3: 22871291-22873786 Arabidopsis thaliana
AT3G61790 0.5kb downstream 0.5kb downstream 500 false Chr3: 22871291-22871790 Arabidopsis thaliana
AT3G61790 1.0kb upstream 1.0kb upstream 2996 true Chr3: 22871791-22874786 Arabidopsis thaliana
AT3G61790 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22873787-22874786 Arabidopsis thaliana
AT3G61790 1.0kb downstream 1.0kb downstream 2996 true Chr3: 22870791-22873786 Arabidopsis thaliana
AT3G61790 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22870791-22871790 Arabidopsis thaliana
AT3G61790 2.0kb upstream 2.0kb upstream 3996 true Chr3: 22871791-22875786 Arabidopsis thaliana
AT3G61790 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22873787-22875786 Arabidopsis thaliana
AT3G61790 2.0kb downstream 2.0kb downstream 3996 true Chr3: 22869791-22873786 Arabidopsis thaliana
AT3G61790 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22869791-22871790 Arabidopsis thaliana
AT3G61790 5.0kb upstream 5.0kb upstream 6996 true Chr3: 22871791-22878786 Arabidopsis thaliana
AT3G61790 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22873787-22878786 Arabidopsis thaliana
AT3G61790 5.0kb downstream 5.0kb downstream 6996 true Chr3: 22866791-22873786 Arabidopsis thaliana
AT3G61790 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22866791-22871790 Arabidopsis thaliana
AT3G61790 10.0kb upstream 10.0kb upstream 11996 true Chr3: 22871791-22883786 Arabidopsis thaliana
AT3G61790 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22873787-22883786 Arabidopsis thaliana
AT3G61790 10.0kb downstream 10.0kb downstream 11996 true Chr3: 22861791-22873786 Arabidopsis thaliana
AT3G61790 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22861791-22871790 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369322 5261 Brassicaceae View MSA
123836007 5264 Brassicales-Malvales View MSA
124338508 5266 SBM View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.861        
cufflinks 17.572        
cufflinks 11.408       Low
cufflinks 20.106       High
cufflinks 14.068        
cufflinks 17.209        

0 Strain