Gene : Eucgr.A00087 E. grandis v2.0
Defline:  (1 of 4) PTHR31669:SF44 - FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN Genomic Order:  91
Name:  ? Eucgr.A00087 Secondary Identifier:  ? PAC:32048270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00087 0.5kb upstream 0.5kb upstream 4104 true Chr01: 1727692-1731795 Eucalyptus grandis
Eucgr.A00087 0.5kb upstream 0.5kb upstream 500 false Chr01: 1727692-1728191 Eucalyptus grandis
Eucgr.A00087 0.5kb downstream 0.5kb downstream 4104 true Chr01: 1728192-1732295 Eucalyptus grandis
Eucgr.A00087 0.5kb downstream 0.5kb downstream 500 false Chr01: 1731796-1732295 Eucalyptus grandis
Eucgr.A00087 1.0kb upstream 1.0kb upstream 4604 true Chr01: 1727192-1731795 Eucalyptus grandis
Eucgr.A00087 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1727192-1728191 Eucalyptus grandis
Eucgr.A00087 1.0kb downstream 1.0kb downstream 4604 true Chr01: 1728192-1732795 Eucalyptus grandis
Eucgr.A00087 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1731796-1732795 Eucalyptus grandis
Eucgr.A00087 2.0kb upstream 2.0kb upstream 5604 true Chr01: 1726192-1731795 Eucalyptus grandis
Eucgr.A00087 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1726192-1728191 Eucalyptus grandis
Eucgr.A00087 2.0kb downstream 2.0kb downstream 5604 true Chr01: 1728192-1733795 Eucalyptus grandis
Eucgr.A00087 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1731796-1733795 Eucalyptus grandis
Eucgr.A00087 5.0kb upstream 5.0kb upstream 8604 true Chr01: 1723192-1731795 Eucalyptus grandis
Eucgr.A00087 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1723192-1728191 Eucalyptus grandis
Eucgr.A00087 5.0kb downstream 5.0kb downstream 8604 true Chr01: 1728192-1736795 Eucalyptus grandis
Eucgr.A00087 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1731796-1736795 Eucalyptus grandis
Eucgr.A00087 10.0kb upstream 10.0kb upstream 13604 true Chr01: 1718192-1731795 Eucalyptus grandis
Eucgr.A00087 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1718192-1728191 Eucalyptus grandis
Eucgr.A00087 10.0kb downstream 10.0kb downstream 13604 true Chr01: 1728192-1741795 Eucalyptus grandis
Eucgr.A00087 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1731796-1741795 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072842 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31413 0.0 8.98297    
cufflinks 2.26438 0.0 6.35864    
cufflinks 3.31834 0.0 8.98084    
cufflinks 1.49051 0.0 4.36589   Low
cufflinks 2.63916 0.0 7.30872    
cufflinks 4.59594 0.0 12.084   High

0 Strain