Gene : Eucgr.A00055 E. grandis v2.0
Defline:  (1 of 2) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  65
Name:  ? Eucgr.A00055 Secondary Identifier:  ? PAC:32047965
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00055 0.5kb upstream 0.5kb upstream 2969 true Chr01: 1254676-1257644 Eucalyptus grandis
Eucgr.A00055 0.5kb upstream 0.5kb upstream 500 false Chr01: 1254676-1255175 Eucalyptus grandis
Eucgr.A00055 0.5kb downstream 0.5kb downstream 2969 true Chr01: 1255176-1258144 Eucalyptus grandis
Eucgr.A00055 0.5kb downstream 0.5kb downstream 500 false Chr01: 1257645-1258144 Eucalyptus grandis
Eucgr.A00055 1.0kb upstream 1.0kb upstream 3469 true Chr01: 1254176-1257644 Eucalyptus grandis
Eucgr.A00055 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1254176-1255175 Eucalyptus grandis
Eucgr.A00055 1.0kb downstream 1.0kb downstream 3469 true Chr01: 1255176-1258644 Eucalyptus grandis
Eucgr.A00055 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1257645-1258644 Eucalyptus grandis
Eucgr.A00055 2.0kb upstream 2.0kb upstream 4469 true Chr01: 1253176-1257644 Eucalyptus grandis
Eucgr.A00055 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1253176-1255175 Eucalyptus grandis
Eucgr.A00055 2.0kb downstream 2.0kb downstream 4469 true Chr01: 1255176-1259644 Eucalyptus grandis
Eucgr.A00055 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1257645-1259644 Eucalyptus grandis
Eucgr.A00055 5.0kb upstream 5.0kb upstream 7469 true Chr01: 1250176-1257644 Eucalyptus grandis
Eucgr.A00055 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1250176-1255175 Eucalyptus grandis
Eucgr.A00055 5.0kb downstream 5.0kb downstream 7469 true Chr01: 1255176-1262644 Eucalyptus grandis
Eucgr.A00055 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1257645-1262644 Eucalyptus grandis
Eucgr.A00055 10.0kb upstream 10.0kb upstream 12469 true Chr01: 1245176-1257644 Eucalyptus grandis
Eucgr.A00055 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1245176-1255175 Eucalyptus grandis
Eucgr.A00055 10.0kb downstream 10.0kb downstream 12469 true Chr01: 1255176-1267644 Eucalyptus grandis
Eucgr.A00055 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1257645-1267644 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.22791 0.0 23.6767   Low
cufflinks 37.7127 0.0 84.9865   High
cufflinks 18.791 0.0 44.9261    
cufflinks 35.5171 0.0 80.6441    
cufflinks 9.05819 0.0 23.2414   Low
cufflinks 26.1053 0.0 60.8608    

0 Strain