Gene : Eucgr.A00041 E. grandis v2.0
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  131
Name:  ? Eucgr.A00041 Secondary Identifier:  ? PAC:32049199
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00041 0.5kb upstream 0.5kb upstream 3259 true Chr01: 2415222-2418480 Eucalyptus grandis
Eucgr.A00041 0.5kb upstream 0.5kb upstream 500 false Chr01: 2417981-2418480 Eucalyptus grandis
Eucgr.A00041 0.5kb downstream 0.5kb downstream 3259 true Chr01: 2414722-2417980 Eucalyptus grandis
Eucgr.A00041 0.5kb downstream 0.5kb downstream 500 false Chr01: 2414722-2415221 Eucalyptus grandis
Eucgr.A00041 1.0kb upstream 1.0kb upstream 3759 true Chr01: 2415222-2418980 Eucalyptus grandis
Eucgr.A00041 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2417981-2418980 Eucalyptus grandis
Eucgr.A00041 1.0kb downstream 1.0kb downstream 3759 true Chr01: 2414222-2417980 Eucalyptus grandis
Eucgr.A00041 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2414222-2415221 Eucalyptus grandis
Eucgr.A00041 2.0kb upstream 2.0kb upstream 4759 true Chr01: 2415222-2419980 Eucalyptus grandis
Eucgr.A00041 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2417981-2419980 Eucalyptus grandis
Eucgr.A00041 2.0kb downstream 2.0kb downstream 4759 true Chr01: 2413222-2417980 Eucalyptus grandis
Eucgr.A00041 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2413222-2415221 Eucalyptus grandis
Eucgr.A00041 5.0kb upstream 5.0kb upstream 7759 true Chr01: 2415222-2422980 Eucalyptus grandis
Eucgr.A00041 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2417981-2422980 Eucalyptus grandis
Eucgr.A00041 5.0kb downstream 5.0kb downstream 7759 true Chr01: 2410222-2417980 Eucalyptus grandis
Eucgr.A00041 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2410222-2415221 Eucalyptus grandis
Eucgr.A00041 10.0kb upstream 10.0kb upstream 12759 true Chr01: 2415222-2427980 Eucalyptus grandis
Eucgr.A00041 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2417981-2427980 Eucalyptus grandis
Eucgr.A00041 10.0kb downstream 10.0kb downstream 12759 true Chr01: 2405222-2417980 Eucalyptus grandis
Eucgr.A00041 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2405222-2415221 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4526 0.0 27.4182    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.51968 0.0 13.5321    
cufflinks 0.126764 0.0 0.685653 Low Low
cufflinks 0.282998 0.0 1.16025 Low  
cufflinks 6.2871 0.0 15.0595    

0 Strain