Gene : Eucgr.A00016 E. grandis v2.0
Defline:  (1 of 1) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  151
Name:  ? Eucgr.A00016 Secondary Identifier:  ? PAC:32046349
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRPSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00016 0.5kb upstream 0.5kb upstream 4521 true Chr01: 2653389-2657909 Eucalyptus grandis
Eucgr.A00016 0.5kb upstream 0.5kb upstream 500 false Chr01: 2653389-2653888 Eucalyptus grandis
Eucgr.A00016 0.5kb downstream 0.5kb downstream 4521 true Chr01: 2653889-2658409 Eucalyptus grandis
Eucgr.A00016 0.5kb downstream 0.5kb downstream 500 false Chr01: 2657910-2658409 Eucalyptus grandis
Eucgr.A00016 1.0kb upstream 1.0kb upstream 5021 true Chr01: 2652889-2657909 Eucalyptus grandis
Eucgr.A00016 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2652889-2653888 Eucalyptus grandis
Eucgr.A00016 1.0kb downstream 1.0kb downstream 5021 true Chr01: 2653889-2658909 Eucalyptus grandis
Eucgr.A00016 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2657910-2658909 Eucalyptus grandis
Eucgr.A00016 2.0kb upstream 2.0kb upstream 6021 true Chr01: 2651889-2657909 Eucalyptus grandis
Eucgr.A00016 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2651889-2653888 Eucalyptus grandis
Eucgr.A00016 2.0kb downstream 2.0kb downstream 6021 true Chr01: 2653889-2659909 Eucalyptus grandis
Eucgr.A00016 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2657910-2659909 Eucalyptus grandis
Eucgr.A00016 5.0kb upstream 5.0kb upstream 9021 true Chr01: 2648889-2657909 Eucalyptus grandis
Eucgr.A00016 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2648889-2653888 Eucalyptus grandis
Eucgr.A00016 5.0kb downstream 5.0kb downstream 9021 true Chr01: 2653889-2662909 Eucalyptus grandis
Eucgr.A00016 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2657910-2662909 Eucalyptus grandis
Eucgr.A00016 10.0kb upstream 10.0kb upstream 14021 true Chr01: 2643889-2657909 Eucalyptus grandis
Eucgr.A00016 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2643889-2653888 Eucalyptus grandis
Eucgr.A00016 10.0kb downstream 10.0kb downstream 14021 true Chr01: 2653889-2667909 Eucalyptus grandis
Eucgr.A00016 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2657910-2667909 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08795 0.0 13.3333    
cufflinks 2.14423 0.0 6.07276   Low
cufflinks 7.23907 0.0 18.2858   High
cufflinks 3.35755 0.0 9.09983    
cufflinks 3.62657 0.0 9.79392    
cufflinks 4.25209 0.0 11.4278    

0 Strain