Gene : Eucgr.A00012 E. grandis v2.0
Defline:  (1 of 3) PTHR30560//PTHR30560:SF4 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE Genomic Order:  154
Name:  ? Eucgr.A00012 Secondary Identifier:  ? PAC:32049224
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00012 0.5kb upstream 0.5kb upstream 6001 true Chr01: 2682571-2688571 Eucalyptus grandis
Eucgr.A00012 0.5kb upstream 0.5kb upstream 500 false Chr01: 2688072-2688571 Eucalyptus grandis
Eucgr.A00012 0.5kb downstream 0.5kb downstream 6001 true Chr01: 2682071-2688071 Eucalyptus grandis
Eucgr.A00012 0.5kb downstream 0.5kb downstream 500 false Chr01: 2682071-2682570 Eucalyptus grandis
Eucgr.A00012 1.0kb upstream 1.0kb upstream 6501 true Chr01: 2682571-2689071 Eucalyptus grandis
Eucgr.A00012 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2688072-2689071 Eucalyptus grandis
Eucgr.A00012 1.0kb downstream 1.0kb downstream 6501 true Chr01: 2681571-2688071 Eucalyptus grandis
Eucgr.A00012 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2681571-2682570 Eucalyptus grandis
Eucgr.A00012 2.0kb upstream 2.0kb upstream 7501 true Chr01: 2682571-2690071 Eucalyptus grandis
Eucgr.A00012 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2688072-2690071 Eucalyptus grandis
Eucgr.A00012 2.0kb downstream 2.0kb downstream 7501 true Chr01: 2680571-2688071 Eucalyptus grandis
Eucgr.A00012 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2680571-2682570 Eucalyptus grandis
Eucgr.A00012 5.0kb upstream 5.0kb upstream 10501 true Chr01: 2682571-2693071 Eucalyptus grandis
Eucgr.A00012 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2688072-2693071 Eucalyptus grandis
Eucgr.A00012 5.0kb downstream 5.0kb downstream 10501 true Chr01: 2677571-2688071 Eucalyptus grandis
Eucgr.A00012 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2677571-2682570 Eucalyptus grandis
Eucgr.A00012 10.0kb upstream 10.0kb upstream 15501 true Chr01: 2682571-2698071 Eucalyptus grandis
Eucgr.A00012 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2688072-2698071 Eucalyptus grandis
Eucgr.A00012 10.0kb downstream 10.0kb downstream 15501 true Chr01: 2672571-2688071 Eucalyptus grandis
Eucgr.A00012 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2672571-2682570 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073258 5270 Rosid View MSA
123748719 5271 Pentapetalae View MSA
122795151 5272 Eudicot View MSA
122048682 5273 Angiosperm View MSA
121348209 5274 Embryophyte View MSA
123380773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85466 0.0 7.94589    
cufflinks 1.86756 0.0 5.32448    
cufflinks 3.37565 0.0 9.07021    
cufflinks 1.839 0.0 5.2407   Low
cufflinks 3.68787 0.0 9.6119    
cufflinks 7.68165 0.0 18.3899   High

0 Strain