Gene : Eucgr.A00780 E. grandis v2.0
Defline:  (1 of 1) PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 Genomic Order:  640
Name:  ? Eucgr.A00780 Secondary Identifier:  ? PAC:32048987
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00780 0.5kb upstream 0.5kb upstream 3175 true Chr01: 12707760-12710934 Eucalyptus grandis
Eucgr.A00780 0.5kb upstream 0.5kb upstream 500 false Chr01: 12710435-12710934 Eucalyptus grandis
Eucgr.A00780 0.5kb downstream 0.5kb downstream 3175 true Chr01: 12707260-12710434 Eucalyptus grandis
Eucgr.A00780 0.5kb downstream 0.5kb downstream 500 false Chr01: 12707260-12707759 Eucalyptus grandis
Eucgr.A00780 1.0kb upstream 1.0kb upstream 3675 true Chr01: 12707760-12711434 Eucalyptus grandis
Eucgr.A00780 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12710435-12711434 Eucalyptus grandis
Eucgr.A00780 1.0kb downstream 1.0kb downstream 3675 true Chr01: 12706760-12710434 Eucalyptus grandis
Eucgr.A00780 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12706760-12707759 Eucalyptus grandis
Eucgr.A00780 2.0kb upstream 2.0kb upstream 4675 true Chr01: 12707760-12712434 Eucalyptus grandis
Eucgr.A00780 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12710435-12712434 Eucalyptus grandis
Eucgr.A00780 2.0kb downstream 2.0kb downstream 4675 true Chr01: 12705760-12710434 Eucalyptus grandis
Eucgr.A00780 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12705760-12707759 Eucalyptus grandis
Eucgr.A00780 5.0kb upstream 5.0kb upstream 7675 true Chr01: 12707760-12715434 Eucalyptus grandis
Eucgr.A00780 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12710435-12715434 Eucalyptus grandis
Eucgr.A00780 5.0kb downstream 5.0kb downstream 7675 true Chr01: 12702760-12710434 Eucalyptus grandis
Eucgr.A00780 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12702760-12707759 Eucalyptus grandis
Eucgr.A00780 10.0kb upstream 10.0kb upstream 12675 true Chr01: 12707760-12720434 Eucalyptus grandis
Eucgr.A00780 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12710435-12720434 Eucalyptus grandis
Eucgr.A00780 10.0kb downstream 10.0kb downstream 12675 true Chr01: 12697760-12710434 Eucalyptus grandis
Eucgr.A00780 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12697760-12707759 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070287 5270 Rosid View MSA
123736857 5271 Pentapetalae View MSA
122790316 5272 Eudicot View MSA
122051044 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.58649 0.0 13.5567    
cufflinks 228.048 0.0 575.262 High High
cufflinks 2.91147 0.0 7.52492   Low
cufflinks 85.2484 0.0 195.654 High  
cufflinks 9.15745 0.0 21.1815    
cufflinks 12.0446 0.0 27.4653    

0 Strain