Gene : Eucgr.A00725 E. grandis v2.0
Defline:  (1 of 2) PTHR22765:SF58 - VACUOLAR-SORTING RECEPTOR 1-RELATED Genomic Order:  679
Name:  ? Eucgr.A00725 Secondary Identifier:  ? PAC:32047509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00725 0.5kb upstream 0.5kb upstream 7268 true Chr01: 13785880-13793147 Eucalyptus grandis
Eucgr.A00725 0.5kb upstream 0.5kb upstream 500 false Chr01: 13792648-13793147 Eucalyptus grandis
Eucgr.A00725 0.5kb downstream 0.5kb downstream 7268 true Chr01: 13785380-13792647 Eucalyptus grandis
Eucgr.A00725 0.5kb downstream 0.5kb downstream 500 false Chr01: 13785380-13785879 Eucalyptus grandis
Eucgr.A00725 1.0kb upstream 1.0kb upstream 7768 true Chr01: 13785880-13793647 Eucalyptus grandis
Eucgr.A00725 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13792648-13793647 Eucalyptus grandis
Eucgr.A00725 1.0kb downstream 1.0kb downstream 7768 true Chr01: 13784880-13792647 Eucalyptus grandis
Eucgr.A00725 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13784880-13785879 Eucalyptus grandis
Eucgr.A00725 2.0kb upstream 2.0kb upstream 8768 true Chr01: 13785880-13794647 Eucalyptus grandis
Eucgr.A00725 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13792648-13794647 Eucalyptus grandis
Eucgr.A00725 2.0kb downstream 2.0kb downstream 8768 true Chr01: 13783880-13792647 Eucalyptus grandis
Eucgr.A00725 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13783880-13785879 Eucalyptus grandis
Eucgr.A00725 5.0kb upstream 5.0kb upstream 11768 true Chr01: 13785880-13797647 Eucalyptus grandis
Eucgr.A00725 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13792648-13797647 Eucalyptus grandis
Eucgr.A00725 5.0kb downstream 5.0kb downstream 11768 true Chr01: 13780880-13792647 Eucalyptus grandis
Eucgr.A00725 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13780880-13785879 Eucalyptus grandis
Eucgr.A00725 10.0kb upstream 10.0kb upstream 16768 true Chr01: 13785880-13802647 Eucalyptus grandis
Eucgr.A00725 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13792648-13802647 Eucalyptus grandis
Eucgr.A00725 10.0kb downstream 10.0kb downstream 16768 true Chr01: 13775880-13792647 Eucalyptus grandis
Eucgr.A00725 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13775880-13785879 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.9209 0.0 118.763 High High
cufflinks 6.05544 0.0 13.9215   Low
cufflinks 47.829 0.0 108.941 High  
cufflinks 12.8396 0.0 28.4806    
cufflinks 13.131 0.0 29.1367    
cufflinks 29.1094 0.0 64.7889    

0 Strain