Gene : Eucgr.A00643 E. grandis v2.0
Defline:  (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase Genomic Order:  745
Name:  ? Eucgr.A00643 Secondary Identifier:  ? PAC:32047484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00643 0.5kb upstream 0.5kb upstream 15153 true Chr01: 15412961-15428113 Eucalyptus grandis
Eucgr.A00643 0.5kb upstream 0.5kb upstream 500 false Chr01: 15412961-15413460 Eucalyptus grandis
Eucgr.A00643 0.5kb downstream 0.5kb downstream 15153 true Chr01: 15413461-15428613 Eucalyptus grandis
Eucgr.A00643 0.5kb downstream 0.5kb downstream 500 false Chr01: 15428114-15428613 Eucalyptus grandis
Eucgr.A00643 1.0kb upstream 1.0kb upstream 15653 true Chr01: 15412461-15428113 Eucalyptus grandis
Eucgr.A00643 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15412461-15413460 Eucalyptus grandis
Eucgr.A00643 1.0kb downstream 1.0kb downstream 15653 true Chr01: 15413461-15429113 Eucalyptus grandis
Eucgr.A00643 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15428114-15429113 Eucalyptus grandis
Eucgr.A00643 2.0kb upstream 2.0kb upstream 16653 true Chr01: 15411461-15428113 Eucalyptus grandis
Eucgr.A00643 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15411461-15413460 Eucalyptus grandis
Eucgr.A00643 2.0kb downstream 2.0kb downstream 16653 true Chr01: 15413461-15430113 Eucalyptus grandis
Eucgr.A00643 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15428114-15430113 Eucalyptus grandis
Eucgr.A00643 5.0kb upstream 5.0kb upstream 19653 true Chr01: 15408461-15428113 Eucalyptus grandis
Eucgr.A00643 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15408461-15413460 Eucalyptus grandis
Eucgr.A00643 5.0kb downstream 5.0kb downstream 19653 true Chr01: 15413461-15433113 Eucalyptus grandis
Eucgr.A00643 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15428114-15433113 Eucalyptus grandis
Eucgr.A00643 10.0kb upstream 10.0kb upstream 24653 true Chr01: 15403461-15428113 Eucalyptus grandis
Eucgr.A00643 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15403461-15413460 Eucalyptus grandis
Eucgr.A00643 10.0kb downstream 10.0kb downstream 24653 true Chr01: 15413461-15438113 Eucalyptus grandis
Eucgr.A00643 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15428114-15438113 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074775 5270 Rosid View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01022 0.0 5.96412   Low
cufflinks 10.8576 0.0 29.2802   High
cufflinks 2.09948 0.0 6.34068   Low
cufflinks 6.67868 0.0 17.5053    
cufflinks 4.4539 0.0 11.8722    
cufflinks 3.70362 0.0 8.77415    

0 Strain