Gene : Eucgr.A00350 E. grandis v2.0
Defline:  (1 of 1) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Genomic Order:  315
Name:  ? Eucgr.A00350 Secondary Identifier:  ? PAC:32047750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00350 0.5kb upstream 0.5kb upstream 2785 true Chr01: 6895465-6898249 Eucalyptus grandis
Eucgr.A00350 0.5kb upstream 0.5kb upstream 500 false Chr01: 6897750-6898249 Eucalyptus grandis
Eucgr.A00350 0.5kb downstream 0.5kb downstream 2785 true Chr01: 6894965-6897749 Eucalyptus grandis
Eucgr.A00350 0.5kb downstream 0.5kb downstream 500 false Chr01: 6894965-6895464 Eucalyptus grandis
Eucgr.A00350 1.0kb upstream 1.0kb upstream 3285 true Chr01: 6895465-6898749 Eucalyptus grandis
Eucgr.A00350 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6897750-6898749 Eucalyptus grandis
Eucgr.A00350 1.0kb downstream 1.0kb downstream 3285 true Chr01: 6894465-6897749 Eucalyptus grandis
Eucgr.A00350 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6894465-6895464 Eucalyptus grandis
Eucgr.A00350 2.0kb upstream 2.0kb upstream 4285 true Chr01: 6895465-6899749 Eucalyptus grandis
Eucgr.A00350 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6897750-6899749 Eucalyptus grandis
Eucgr.A00350 2.0kb downstream 2.0kb downstream 4285 true Chr01: 6893465-6897749 Eucalyptus grandis
Eucgr.A00350 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6893465-6895464 Eucalyptus grandis
Eucgr.A00350 5.0kb upstream 5.0kb upstream 7285 true Chr01: 6895465-6902749 Eucalyptus grandis
Eucgr.A00350 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6897750-6902749 Eucalyptus grandis
Eucgr.A00350 5.0kb downstream 5.0kb downstream 7285 true Chr01: 6890465-6897749 Eucalyptus grandis
Eucgr.A00350 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6890465-6895464 Eucalyptus grandis
Eucgr.A00350 10.0kb upstream 10.0kb upstream 12285 true Chr01: 6895465-6907749 Eucalyptus grandis
Eucgr.A00350 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6897750-6907749 Eucalyptus grandis
Eucgr.A00350 10.0kb downstream 10.0kb downstream 12285 true Chr01: 6885465-6897749 Eucalyptus grandis
Eucgr.A00350 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6885465-6895464 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2643 0.0 31.0247    
cufflinks 30.746 0.0 68.6116    
cufflinks 19.532 0.0 44.5267    
cufflinks 71.3503 0.0 158.322 High  
cufflinks 99.1581 0.0 222.215 High High
cufflinks 3.15569 0.0 8.48115   Low

0 Strain