Gene : Eucgr.A00275 E. grandis v2.0
Defline:  (1 of 3) 4.1.99.18 - Cyclic pyranopterin phosphate synthase / Molybdenum cofactor biosynthesis protein 1 Genomic Order:  53
Name:  ? Eucgr.A00275 Secondary Identifier:  ? PAC:32047584
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6823 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00275 0.5kb upstream 0.5kb upstream 3872 true Chr01: 1013482-1017353 Eucalyptus grandis
Eucgr.A00275 0.5kb upstream 0.5kb upstream 500 false Chr01: 1013482-1013981 Eucalyptus grandis
Eucgr.A00275 0.5kb downstream 0.5kb downstream 3872 true Chr01: 1013982-1017853 Eucalyptus grandis
Eucgr.A00275 0.5kb downstream 0.5kb downstream 500 false Chr01: 1017354-1017853 Eucalyptus grandis
Eucgr.A00275 1.0kb upstream 1.0kb upstream 4372 true Chr01: 1012982-1017353 Eucalyptus grandis
Eucgr.A00275 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1012982-1013981 Eucalyptus grandis
Eucgr.A00275 1.0kb downstream 1.0kb downstream 4372 true Chr01: 1013982-1018353 Eucalyptus grandis
Eucgr.A00275 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1017354-1018353 Eucalyptus grandis
Eucgr.A00275 2.0kb upstream 2.0kb upstream 5372 true Chr01: 1011982-1017353 Eucalyptus grandis
Eucgr.A00275 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1011982-1013981 Eucalyptus grandis
Eucgr.A00275 2.0kb downstream 2.0kb downstream 5372 true Chr01: 1013982-1019353 Eucalyptus grandis
Eucgr.A00275 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1017354-1019353 Eucalyptus grandis
Eucgr.A00275 5.0kb upstream 5.0kb upstream 8372 true Chr01: 1008982-1017353 Eucalyptus grandis
Eucgr.A00275 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1008982-1013981 Eucalyptus grandis
Eucgr.A00275 5.0kb downstream 5.0kb downstream 8372 true Chr01: 1013982-1022353 Eucalyptus grandis
Eucgr.A00275 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1017354-1022353 Eucalyptus grandis
Eucgr.A00275 10.0kb upstream 10.0kb upstream 13372 true Chr01: 1003982-1017353 Eucalyptus grandis
Eucgr.A00275 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1003982-1013981 Eucalyptus grandis
Eucgr.A00275 10.0kb downstream 10.0kb downstream 13372 true Chr01: 1013982-1027353 Eucalyptus grandis
Eucgr.A00275 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1017354-1027353 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063130 5270 Rosid View MSA
123740068 5271 Pentapetalae View MSA
122786980 5272 Eudicot View MSA
122042383 5273 Angiosperm View MSA
121347493 5274 Embryophyte View MSA
123426886 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3788 0.0 51.8542    
cufflinks 0.0390725 0.0 0.211298 Low Low
cufflinks 18.2085 0.0 40.6166    
cufflinks 3.95042 0.0 9.88795    
cufflinks 0.537571 0.0 1.66758 Low  
cufflinks 16.9499 0.0 38.0298    

0 Strain