Gene : Eucgr.A00256 E. grandis v2.0
Defline:  (1 of 3) PTHR22976 - BIOTIN SYNTHASE Genomic Order:  34
Name:  ? Eucgr.A00256 Secondary Identifier:  ? PAC:32046569
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1507 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00256 0.5kb upstream 0.5kb upstream 6080 true Chr01: 746580-752659 Eucalyptus grandis
Eucgr.A00256 0.5kb upstream 0.5kb upstream 500 false Chr01: 746580-747079 Eucalyptus grandis
Eucgr.A00256 0.5kb downstream 0.5kb downstream 6080 true Chr01: 747080-753159 Eucalyptus grandis
Eucgr.A00256 0.5kb downstream 0.5kb downstream 500 false Chr01: 752660-753159 Eucalyptus grandis
Eucgr.A00256 1.0kb upstream 1.0kb upstream 6580 true Chr01: 746080-752659 Eucalyptus grandis
Eucgr.A00256 1.0kb upstream 1.0kb upstream 1000 false Chr01: 746080-747079 Eucalyptus grandis
Eucgr.A00256 1.0kb downstream 1.0kb downstream 6580 true Chr01: 747080-753659 Eucalyptus grandis
Eucgr.A00256 1.0kb downstream 1.0kb downstream 1000 false Chr01: 752660-753659 Eucalyptus grandis
Eucgr.A00256 2.0kb upstream 2.0kb upstream 7580 true Chr01: 745080-752659 Eucalyptus grandis
Eucgr.A00256 2.0kb upstream 2.0kb upstream 2000 false Chr01: 745080-747079 Eucalyptus grandis
Eucgr.A00256 2.0kb downstream 2.0kb downstream 7580 true Chr01: 747080-754659 Eucalyptus grandis
Eucgr.A00256 2.0kb downstream 2.0kb downstream 2000 false Chr01: 752660-754659 Eucalyptus grandis
Eucgr.A00256 5.0kb upstream 5.0kb upstream 10580 true Chr01: 742080-752659 Eucalyptus grandis
Eucgr.A00256 5.0kb upstream 5.0kb upstream 5000 false Chr01: 742080-747079 Eucalyptus grandis
Eucgr.A00256 5.0kb downstream 5.0kb downstream 10580 true Chr01: 747080-757659 Eucalyptus grandis
Eucgr.A00256 5.0kb downstream 5.0kb downstream 5000 false Chr01: 752660-757659 Eucalyptus grandis
Eucgr.A00256 10.0kb upstream 10.0kb upstream 15580 true Chr01: 737080-752659 Eucalyptus grandis
Eucgr.A00256 10.0kb upstream 10.0kb upstream 10000 false Chr01: 737080-747079 Eucalyptus grandis
Eucgr.A00256 10.0kb downstream 10.0kb downstream 15580 true Chr01: 747080-762659 Eucalyptus grandis
Eucgr.A00256 10.0kb downstream 10.0kb downstream 10000 false Chr01: 752660-762659 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0084 0.0 8.0388    
cufflinks 0.638022 0.0 2.20174 Low Low
cufflinks 2.9006 0.0 9.98069    
cufflinks 1.66965 0.0 4.78595    
cufflinks 1.95526 0.0 5.63122    
cufflinks 2.90255 0.0 7.98865    

0 Strain