Gene : Eucgr.A01141 E. grandis v2.0
Defline:  (1 of 1) PTHR10741:SF2 - TRANSLIN Genomic Order:  1109
Name:  ? Eucgr.A01141 Secondary Identifier:  ? PAC:32047516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01141 0.5kb upstream 0.5kb upstream 6352 true Chr01: 25201506-25207857 Eucalyptus grandis
Eucgr.A01141 0.5kb upstream 0.5kb upstream 500 false Chr01: 25201506-25202005 Eucalyptus grandis
Eucgr.A01141 0.5kb downstream 0.5kb downstream 6352 true Chr01: 25202006-25208357 Eucalyptus grandis
Eucgr.A01141 0.5kb downstream 0.5kb downstream 500 false Chr01: 25207858-25208357 Eucalyptus grandis
Eucgr.A01141 1.0kb upstream 1.0kb upstream 6852 true Chr01: 25201006-25207857 Eucalyptus grandis
Eucgr.A01141 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25201006-25202005 Eucalyptus grandis
Eucgr.A01141 1.0kb downstream 1.0kb downstream 6852 true Chr01: 25202006-25208857 Eucalyptus grandis
Eucgr.A01141 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25207858-25208857 Eucalyptus grandis
Eucgr.A01141 2.0kb upstream 2.0kb upstream 7852 true Chr01: 25200006-25207857 Eucalyptus grandis
Eucgr.A01141 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25200006-25202005 Eucalyptus grandis
Eucgr.A01141 2.0kb downstream 2.0kb downstream 7852 true Chr01: 25202006-25209857 Eucalyptus grandis
Eucgr.A01141 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25207858-25209857 Eucalyptus grandis
Eucgr.A01141 5.0kb upstream 5.0kb upstream 10852 true Chr01: 25197006-25207857 Eucalyptus grandis
Eucgr.A01141 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25197006-25202005 Eucalyptus grandis
Eucgr.A01141 5.0kb downstream 5.0kb downstream 10852 true Chr01: 25202006-25212857 Eucalyptus grandis
Eucgr.A01141 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25207858-25212857 Eucalyptus grandis
Eucgr.A01141 10.0kb upstream 10.0kb upstream 15852 true Chr01: 25192006-25207857 Eucalyptus grandis
Eucgr.A01141 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25192006-25202005 Eucalyptus grandis
Eucgr.A01141 10.0kb downstream 10.0kb downstream 15852 true Chr01: 25202006-25217857 Eucalyptus grandis
Eucgr.A01141 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25207858-25217857 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066940 5270 Rosid View MSA
123747693 5271 Pentapetalae View MSA
122792898 5272 Eudicot View MSA
122045225 5273 Angiosperm View MSA
121345043 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8618 0.0 43.5324    
cufflinks 16.3453 0.0 37.9258    
cufflinks 20.6071 0.0 47.5228    
cufflinks 15.9932 0.0 37.2385    
cufflinks 10.7556 0.0 25.1304   Low
cufflinks 24.3874 0.0 55.1444   High

0 Strain