Gene : Eucgr.A01047 E. grandis v2.0
Defline:  (1 of 1) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  1460
Name:  ? Eucgr.A01047 Secondary Identifier:  ? PAC:32047591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01047 0.5kb upstream 0.5kb upstream 2695 true Chr01: 30715908-30718602 Eucalyptus grandis
Eucgr.A01047 0.5kb upstream 0.5kb upstream 500 false Chr01: 30718103-30718602 Eucalyptus grandis
Eucgr.A01047 0.5kb downstream 0.5kb downstream 2695 true Chr01: 30715408-30718102 Eucalyptus grandis
Eucgr.A01047 0.5kb downstream 0.5kb downstream 500 false Chr01: 30715408-30715907 Eucalyptus grandis
Eucgr.A01047 1.0kb upstream 1.0kb upstream 3195 true Chr01: 30715908-30719102 Eucalyptus grandis
Eucgr.A01047 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30718103-30719102 Eucalyptus grandis
Eucgr.A01047 1.0kb downstream 1.0kb downstream 3195 true Chr01: 30714908-30718102 Eucalyptus grandis
Eucgr.A01047 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30714908-30715907 Eucalyptus grandis
Eucgr.A01047 2.0kb upstream 2.0kb upstream 4195 true Chr01: 30715908-30720102 Eucalyptus grandis
Eucgr.A01047 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30718103-30720102 Eucalyptus grandis
Eucgr.A01047 2.0kb downstream 2.0kb downstream 4195 true Chr01: 30713908-30718102 Eucalyptus grandis
Eucgr.A01047 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30713908-30715907 Eucalyptus grandis
Eucgr.A01047 5.0kb upstream 5.0kb upstream 7195 true Chr01: 30715908-30723102 Eucalyptus grandis
Eucgr.A01047 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30718103-30723102 Eucalyptus grandis
Eucgr.A01047 5.0kb downstream 5.0kb downstream 7195 true Chr01: 30710908-30718102 Eucalyptus grandis
Eucgr.A01047 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30710908-30715907 Eucalyptus grandis
Eucgr.A01047 10.0kb upstream 10.0kb upstream 12195 true Chr01: 30715908-30728102 Eucalyptus grandis
Eucgr.A01047 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30718103-30728102 Eucalyptus grandis
Eucgr.A01047 10.0kb downstream 10.0kb downstream 12195 true Chr01: 30705908-30718102 Eucalyptus grandis
Eucgr.A01047 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30705908-30715907 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 434.707 0.0 1249.58 High  
cufflinks 24.1641 0.0 54.5729    
cufflinks 178.763 0.0 424.914 High  
cufflinks 3.54942 0.0 10.8864   Low
cufflinks 2.55472 0.0 8.04633   Low
cufflinks 1688.21 0.0 6771.6 High High

0 Strain