Gene : Eucgr.A00953 E. grandis v2.0
Defline:  (1 of 6) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  495
Name:  ? Eucgr.A00953 Secondary Identifier:  ? PAC:32045974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A00953 0.5kb upstream 0.5kb upstream 2787 true Chr01: 10485841-10488627 Eucalyptus grandis
Eucgr.A00953 0.5kb upstream 0.5kb upstream 500 false Chr01: 10485841-10486340 Eucalyptus grandis
Eucgr.A00953 0.5kb downstream 0.5kb downstream 2787 true Chr01: 10486341-10489127 Eucalyptus grandis
Eucgr.A00953 0.5kb downstream 0.5kb downstream 500 false Chr01: 10488628-10489127 Eucalyptus grandis
Eucgr.A00953 1.0kb upstream 1.0kb upstream 3287 true Chr01: 10485341-10488627 Eucalyptus grandis
Eucgr.A00953 1.0kb upstream 1.0kb upstream 1000 false Chr01: 10485341-10486340 Eucalyptus grandis
Eucgr.A00953 1.0kb downstream 1.0kb downstream 3287 true Chr01: 10486341-10489627 Eucalyptus grandis
Eucgr.A00953 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10488628-10489627 Eucalyptus grandis
Eucgr.A00953 2.0kb upstream 2.0kb upstream 4287 true Chr01: 10484341-10488627 Eucalyptus grandis
Eucgr.A00953 2.0kb upstream 2.0kb upstream 2000 false Chr01: 10484341-10486340 Eucalyptus grandis
Eucgr.A00953 2.0kb downstream 2.0kb downstream 4287 true Chr01: 10486341-10490627 Eucalyptus grandis
Eucgr.A00953 2.0kb downstream 2.0kb downstream 2000 false Chr01: 10488628-10490627 Eucalyptus grandis
Eucgr.A00953 5.0kb upstream 5.0kb upstream 7287 true Chr01: 10481341-10488627 Eucalyptus grandis
Eucgr.A00953 5.0kb upstream 5.0kb upstream 5000 false Chr01: 10481341-10486340 Eucalyptus grandis
Eucgr.A00953 5.0kb downstream 5.0kb downstream 7287 true Chr01: 10486341-10493627 Eucalyptus grandis
Eucgr.A00953 5.0kb downstream 5.0kb downstream 5000 false Chr01: 10488628-10493627 Eucalyptus grandis
Eucgr.A00953 10.0kb upstream 10.0kb upstream 12287 true Chr01: 10476341-10488627 Eucalyptus grandis
Eucgr.A00953 10.0kb upstream 10.0kb upstream 10000 false Chr01: 10476341-10486340 Eucalyptus grandis
Eucgr.A00953 10.0kb downstream 10.0kb downstream 12287 true Chr01: 10486341-10498627 Eucalyptus grandis
Eucgr.A00953 10.0kb downstream 10.0kb downstream 10000 false Chr01: 10488628-10498627 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
124050308 5270 Rosid View MSA
123737352 5271 Pentapetalae View MSA
122796738 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.9803 0.0 86.2463 High  
cufflinks 34.1037 0.0 75.4297    
cufflinks 30.0886 0.0 66.555 High  
cufflinks 43.0208 0.0 95.4167 High High
cufflinks 34.4389 0.0 76.161    
cufflinks 24.0995 0.0 53.5692   Low

0 Strain