Gene : Eucgr.A01665 E. grandis v2.0
Defline:  (1 of 1) PTHR21562:SF6 - PECTINACETYLESTERASE FAMILY PROTEIN Genomic Order:  1141
Name:  ? Eucgr.A01665 Secondary Identifier:  ? PAC:32047656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01665 0.5kb upstream 0.5kb upstream 13865 true Chr01: 25702463-25716327 Eucalyptus grandis
Eucgr.A01665 0.5kb upstream 0.5kb upstream 500 false Chr01: 25715828-25716327 Eucalyptus grandis
Eucgr.A01665 0.5kb downstream 0.5kb downstream 13865 true Chr01: 25701963-25715827 Eucalyptus grandis
Eucgr.A01665 0.5kb downstream 0.5kb downstream 500 false Chr01: 25701963-25702462 Eucalyptus grandis
Eucgr.A01665 1.0kb upstream 1.0kb upstream 14365 true Chr01: 25702463-25716827 Eucalyptus grandis
Eucgr.A01665 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25715828-25716827 Eucalyptus grandis
Eucgr.A01665 1.0kb downstream 1.0kb downstream 14365 true Chr01: 25701463-25715827 Eucalyptus grandis
Eucgr.A01665 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25701463-25702462 Eucalyptus grandis
Eucgr.A01665 2.0kb upstream 2.0kb upstream 15365 true Chr01: 25702463-25717827 Eucalyptus grandis
Eucgr.A01665 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25715828-25717827 Eucalyptus grandis
Eucgr.A01665 2.0kb downstream 2.0kb downstream 15365 true Chr01: 25700463-25715827 Eucalyptus grandis
Eucgr.A01665 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25700463-25702462 Eucalyptus grandis
Eucgr.A01665 5.0kb upstream 5.0kb upstream 18365 true Chr01: 25702463-25720827 Eucalyptus grandis
Eucgr.A01665 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25715828-25720827 Eucalyptus grandis
Eucgr.A01665 5.0kb downstream 5.0kb downstream 18365 true Chr01: 25697463-25715827 Eucalyptus grandis
Eucgr.A01665 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25697463-25702462 Eucalyptus grandis
Eucgr.A01665 10.0kb upstream 10.0kb upstream 23365 true Chr01: 25702463-25725827 Eucalyptus grandis
Eucgr.A01665 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25715828-25725827 Eucalyptus grandis
Eucgr.A01665 10.0kb downstream 10.0kb downstream 23365 true Chr01: 25692463-25715827 Eucalyptus grandis
Eucgr.A01665 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25692463-25702462 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061185 5270 Rosid View MSA
123736666 5271 Pentapetalae View MSA
122769871 5272 Eudicot View MSA
122042324 5273 Angiosperm View MSA
121351620 5274 Embryophyte View MSA
123428380 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8037 0.0 14.0664    
cufflinks 7.32588 0.0 17.2909   High
cufflinks 5.29516 0.0 15.0099    
cufflinks 6.29413 0.0 15.0277    
cufflinks 2.63986 0.0 7.33033   Low
cufflinks 3.77157 0.0 9.85394    

0 Strain