Gene : Eucgr.A01600 E. grandis v2.0
Defline:  (1 of 1) PTHR11746//PTHR11746:SF90 - O-METHYLTRANSFERASE Genomic Order:  1190
Name:  ? Eucgr.A01600 Secondary Identifier:  ? PAC:32048511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01600 0.5kb upstream 0.5kb upstream 10927 true Chr01: 26905904-26916830 Eucalyptus grandis
Eucgr.A01600 0.5kb upstream 0.5kb upstream 500 false Chr01: 26916331-26916830 Eucalyptus grandis
Eucgr.A01600 0.5kb downstream 0.5kb downstream 10927 true Chr01: 26905404-26916330 Eucalyptus grandis
Eucgr.A01600 0.5kb downstream 0.5kb downstream 500 false Chr01: 26905404-26905903 Eucalyptus grandis
Eucgr.A01600 1.0kb upstream 1.0kb upstream 11427 true Chr01: 26905904-26917330 Eucalyptus grandis
Eucgr.A01600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26916331-26917330 Eucalyptus grandis
Eucgr.A01600 1.0kb downstream 1.0kb downstream 11427 true Chr01: 26904904-26916330 Eucalyptus grandis
Eucgr.A01600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26904904-26905903 Eucalyptus grandis
Eucgr.A01600 2.0kb upstream 2.0kb upstream 12427 true Chr01: 26905904-26918330 Eucalyptus grandis
Eucgr.A01600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26916331-26918330 Eucalyptus grandis
Eucgr.A01600 2.0kb downstream 2.0kb downstream 12427 true Chr01: 26903904-26916330 Eucalyptus grandis
Eucgr.A01600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26903904-26905903 Eucalyptus grandis
Eucgr.A01600 5.0kb upstream 5.0kb upstream 15427 true Chr01: 26905904-26921330 Eucalyptus grandis
Eucgr.A01600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26916331-26921330 Eucalyptus grandis
Eucgr.A01600 5.0kb downstream 5.0kb downstream 15427 true Chr01: 26900904-26916330 Eucalyptus grandis
Eucgr.A01600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26900904-26905903 Eucalyptus grandis
Eucgr.A01600 10.0kb upstream 10.0kb upstream 20427 true Chr01: 26905904-26926330 Eucalyptus grandis
Eucgr.A01600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26916331-26926330 Eucalyptus grandis
Eucgr.A01600 10.0kb downstream 10.0kb downstream 20427 true Chr01: 26895904-26916330 Eucalyptus grandis
Eucgr.A01600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26895904-26905903 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062425 5270 Rosid View MSA
123741168 5271 Pentapetalae View MSA
122789556 5272 Eudicot View MSA
122042759 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121310018 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.81647 0.0 10.5854    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.99524 0.0 11.1352    
cufflinks 0.589923 0.0 2.19414   Low
cufflinks 0.769381 0.0 2.84236    
cufflinks 4.31497 0.0 11.6457    

0 Strain