Gene : Eucgr.A01517 E. grandis v2.0
Defline:  (1 of 2) PTHR14233//PTHR14233:SF13 - DUF914-RELATED Genomic Order:  1268
Name:  ? Eucgr.A01517 Secondary Identifier:  ? PAC:32048001
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01517 0.5kb upstream 0.5kb upstream 5687 true Chr01: 28411363-28417049 Eucalyptus grandis
Eucgr.A01517 0.5kb upstream 0.5kb upstream 500 false Chr01: 28416550-28417049 Eucalyptus grandis
Eucgr.A01517 0.5kb downstream 0.5kb downstream 5687 true Chr01: 28410863-28416549 Eucalyptus grandis
Eucgr.A01517 0.5kb downstream 0.5kb downstream 500 false Chr01: 28410863-28411362 Eucalyptus grandis
Eucgr.A01517 1.0kb upstream 1.0kb upstream 6187 true Chr01: 28411363-28417549 Eucalyptus grandis
Eucgr.A01517 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28416550-28417549 Eucalyptus grandis
Eucgr.A01517 1.0kb downstream 1.0kb downstream 6187 true Chr01: 28410363-28416549 Eucalyptus grandis
Eucgr.A01517 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28410363-28411362 Eucalyptus grandis
Eucgr.A01517 2.0kb upstream 2.0kb upstream 7187 true Chr01: 28411363-28418549 Eucalyptus grandis
Eucgr.A01517 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28416550-28418549 Eucalyptus grandis
Eucgr.A01517 2.0kb downstream 2.0kb downstream 7187 true Chr01: 28409363-28416549 Eucalyptus grandis
Eucgr.A01517 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28409363-28411362 Eucalyptus grandis
Eucgr.A01517 5.0kb upstream 5.0kb upstream 10187 true Chr01: 28411363-28421549 Eucalyptus grandis
Eucgr.A01517 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28416550-28421549 Eucalyptus grandis
Eucgr.A01517 5.0kb downstream 5.0kb downstream 10187 true Chr01: 28406363-28416549 Eucalyptus grandis
Eucgr.A01517 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28406363-28411362 Eucalyptus grandis
Eucgr.A01517 10.0kb upstream 10.0kb upstream 15187 true Chr01: 28411363-28426549 Eucalyptus grandis
Eucgr.A01517 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28416550-28426549 Eucalyptus grandis
Eucgr.A01517 10.0kb downstream 10.0kb downstream 15187 true Chr01: 28401363-28416549 Eucalyptus grandis
Eucgr.A01517 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28401363-28411362 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071571 5270 Rosid View MSA
123750685 5271 Pentapetalae View MSA
122794393 5272 Eudicot View MSA
122043877 5273 Angiosperm View MSA
121345871 5274 Embryophyte View MSA
123426042 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17281 0.0 6.22502    
cufflinks 4.74865 0.0 12.1309   High
cufflinks 5.28221 0.0 17.2205   High
cufflinks 2.97377 0.0 10.4534    
cufflinks 1.54206 0.0 4.78496   Low
cufflinks 2.49518 0.0 7.13644    

0 Strain