Gene : Eucgr.A01467 E. grandis v2.0
Defline:  (1 of 1) PTHR12786:SF2 - SPLICING FACTOR 3A SUBUNIT 3 Genomic Order:  1311
Name:  ? Eucgr.A01467 Secondary Identifier:  ? PAC:32047536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01467 0.5kb upstream 0.5kb upstream 7086 true Chr01: 28965527-28972612 Eucalyptus grandis
Eucgr.A01467 0.5kb upstream 0.5kb upstream 500 false Chr01: 28965527-28966026 Eucalyptus grandis
Eucgr.A01467 0.5kb downstream 0.5kb downstream 7086 true Chr01: 28966027-28973112 Eucalyptus grandis
Eucgr.A01467 0.5kb downstream 0.5kb downstream 500 false Chr01: 28972613-28973112 Eucalyptus grandis
Eucgr.A01467 1.0kb upstream 1.0kb upstream 7586 true Chr01: 28965027-28972612 Eucalyptus grandis
Eucgr.A01467 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28965027-28966026 Eucalyptus grandis
Eucgr.A01467 1.0kb downstream 1.0kb downstream 7586 true Chr01: 28966027-28973612 Eucalyptus grandis
Eucgr.A01467 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28972613-28973612 Eucalyptus grandis
Eucgr.A01467 2.0kb upstream 2.0kb upstream 8586 true Chr01: 28964027-28972612 Eucalyptus grandis
Eucgr.A01467 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28964027-28966026 Eucalyptus grandis
Eucgr.A01467 2.0kb downstream 2.0kb downstream 8586 true Chr01: 28966027-28974612 Eucalyptus grandis
Eucgr.A01467 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28972613-28974612 Eucalyptus grandis
Eucgr.A01467 5.0kb upstream 5.0kb upstream 11586 true Chr01: 28961027-28972612 Eucalyptus grandis
Eucgr.A01467 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28961027-28966026 Eucalyptus grandis
Eucgr.A01467 5.0kb downstream 5.0kb downstream 11586 true Chr01: 28966027-28977612 Eucalyptus grandis
Eucgr.A01467 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28972613-28977612 Eucalyptus grandis
Eucgr.A01467 10.0kb upstream 10.0kb upstream 16586 true Chr01: 28956027-28972612 Eucalyptus grandis
Eucgr.A01467 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28956027-28966026 Eucalyptus grandis
Eucgr.A01467 10.0kb downstream 10.0kb downstream 16586 true Chr01: 28966027-28982612 Eucalyptus grandis
Eucgr.A01467 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28972613-28982612 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061347 5270 Rosid View MSA
123747659 5271 Pentapetalae View MSA
122793662 5272 Eudicot View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.0693 0.0 60.0007   High
cufflinks 17.5894 0.0 38.9175    
cufflinks 22.8779 0.0 50.6239    
cufflinks 17.5451 0.0 38.8096    
cufflinks 17.5408 0.0 38.8138    
cufflinks 23.4012 0.0 51.7754    

0 Strain