Gene : Eucgr.A01455 E. grandis v2.0
Defline:  (1 of 1) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  1323
Name:  ? Eucgr.A01455 Secondary Identifier:  ? PAC:32047343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01455 0.5kb upstream 0.5kb upstream 3969 true Chr01: 29127040-29131008 Eucalyptus grandis
Eucgr.A01455 0.5kb upstream 0.5kb upstream 500 false Chr01: 29127040-29127539 Eucalyptus grandis
Eucgr.A01455 0.5kb downstream 0.5kb downstream 3969 true Chr01: 29127540-29131508 Eucalyptus grandis
Eucgr.A01455 0.5kb downstream 0.5kb downstream 500 false Chr01: 29131009-29131508 Eucalyptus grandis
Eucgr.A01455 1.0kb upstream 1.0kb upstream 4469 true Chr01: 29126540-29131008 Eucalyptus grandis
Eucgr.A01455 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29126540-29127539 Eucalyptus grandis
Eucgr.A01455 1.0kb downstream 1.0kb downstream 4469 true Chr01: 29127540-29132008 Eucalyptus grandis
Eucgr.A01455 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29131009-29132008 Eucalyptus grandis
Eucgr.A01455 2.0kb upstream 2.0kb upstream 5469 true Chr01: 29125540-29131008 Eucalyptus grandis
Eucgr.A01455 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29125540-29127539 Eucalyptus grandis
Eucgr.A01455 2.0kb downstream 2.0kb downstream 5469 true Chr01: 29127540-29133008 Eucalyptus grandis
Eucgr.A01455 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29131009-29133008 Eucalyptus grandis
Eucgr.A01455 5.0kb upstream 5.0kb upstream 8469 true Chr01: 29122540-29131008 Eucalyptus grandis
Eucgr.A01455 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29122540-29127539 Eucalyptus grandis
Eucgr.A01455 5.0kb downstream 5.0kb downstream 8469 true Chr01: 29127540-29136008 Eucalyptus grandis
Eucgr.A01455 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29131009-29136008 Eucalyptus grandis
Eucgr.A01455 10.0kb upstream 10.0kb upstream 13469 true Chr01: 29117540-29131008 Eucalyptus grandis
Eucgr.A01455 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29117540-29127539 Eucalyptus grandis
Eucgr.A01455 10.0kb downstream 10.0kb downstream 13469 true Chr01: 29127540-29141008 Eucalyptus grandis
Eucgr.A01455 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29131009-29141008 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.8389 0.0 42.3225    
cufflinks 473.062 0.0 1883.53 High High
cufflinks 2.60258 0.0 7.04763   Low
cufflinks 378.909 0.0 1362.08 High High
cufflinks 24.4445 0.0 54.8176    
cufflinks 25.872 0.0 58.8808    

0 Strain