Gene : Eucgr.A01383 E. grandis v2.0
Defline:  (1 of 2) PTHR31133:SF2 - EXPRESSED PROTEIN Genomic Order:  466
Name:  ? Eucgr.A01383 Secondary Identifier:  ? PAC:32046956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01383 0.5kb upstream 0.5kb upstream 4331 true Chr01: 9230579-9234909 Eucalyptus grandis
Eucgr.A01383 0.5kb upstream 0.5kb upstream 500 false Chr01: 9234410-9234909 Eucalyptus grandis
Eucgr.A01383 0.5kb downstream 0.5kb downstream 4331 true Chr01: 9230079-9234409 Eucalyptus grandis
Eucgr.A01383 0.5kb downstream 0.5kb downstream 500 false Chr01: 9230079-9230578 Eucalyptus grandis
Eucgr.A01383 1.0kb upstream 1.0kb upstream 4831 true Chr01: 9230579-9235409 Eucalyptus grandis
Eucgr.A01383 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9234410-9235409 Eucalyptus grandis
Eucgr.A01383 1.0kb downstream 1.0kb downstream 4831 true Chr01: 9229579-9234409 Eucalyptus grandis
Eucgr.A01383 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9229579-9230578 Eucalyptus grandis
Eucgr.A01383 2.0kb upstream 2.0kb upstream 5831 true Chr01: 9230579-9236409 Eucalyptus grandis
Eucgr.A01383 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9234410-9236409 Eucalyptus grandis
Eucgr.A01383 2.0kb downstream 2.0kb downstream 5831 true Chr01: 9228579-9234409 Eucalyptus grandis
Eucgr.A01383 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9228579-9230578 Eucalyptus grandis
Eucgr.A01383 5.0kb upstream 5.0kb upstream 8831 true Chr01: 9230579-9239409 Eucalyptus grandis
Eucgr.A01383 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9234410-9239409 Eucalyptus grandis
Eucgr.A01383 5.0kb downstream 5.0kb downstream 8831 true Chr01: 9225579-9234409 Eucalyptus grandis
Eucgr.A01383 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9225579-9230578 Eucalyptus grandis
Eucgr.A01383 10.0kb upstream 10.0kb upstream 13831 true Chr01: 9230579-9244409 Eucalyptus grandis
Eucgr.A01383 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9234410-9244409 Eucalyptus grandis
Eucgr.A01383 10.0kb downstream 10.0kb downstream 13831 true Chr01: 9220579-9234409 Eucalyptus grandis
Eucgr.A01383 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9220579-9230578 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066671 5270 Rosid View MSA
123736782 5271 Pentapetalae View MSA
122792901 5272 Eudicot View MSA
122043986 5273 Angiosperm View MSA
121350434 5274 Embryophyte View MSA
123381729 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.455741 0.0 1.42472 Low Low
cufflinks 1.2259 0.0 3.41881    
cufflinks 0.766656 0.0 2.24926    
cufflinks 4.15516 0.0 10.2256    
cufflinks 8.18584 0.0 19.0061   High
cufflinks 0.734334 0.0 2.17112 Low  

0 Strain