Gene : Eucgr.A01322 E. grandis v2.0
Defline:  (1 of 1) PTHR12217 - LIGATIN Genomic Order:  416
Name:  ? Eucgr.A01322 Secondary Identifier:  ? PAC:32047457
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01322 0.5kb upstream 0.5kb upstream 6143 true Chr01: 8216851-8222993 Eucalyptus grandis
Eucgr.A01322 0.5kb upstream 0.5kb upstream 500 false Chr01: 8222494-8222993 Eucalyptus grandis
Eucgr.A01322 0.5kb downstream 0.5kb downstream 6143 true Chr01: 8216351-8222493 Eucalyptus grandis
Eucgr.A01322 0.5kb downstream 0.5kb downstream 500 false Chr01: 8216351-8216850 Eucalyptus grandis
Eucgr.A01322 1.0kb upstream 1.0kb upstream 6643 true Chr01: 8216851-8223493 Eucalyptus grandis
Eucgr.A01322 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8222494-8223493 Eucalyptus grandis
Eucgr.A01322 1.0kb downstream 1.0kb downstream 6643 true Chr01: 8215851-8222493 Eucalyptus grandis
Eucgr.A01322 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8215851-8216850 Eucalyptus grandis
Eucgr.A01322 2.0kb upstream 2.0kb upstream 7643 true Chr01: 8216851-8224493 Eucalyptus grandis
Eucgr.A01322 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8222494-8224493 Eucalyptus grandis
Eucgr.A01322 2.0kb downstream 2.0kb downstream 7643 true Chr01: 8214851-8222493 Eucalyptus grandis
Eucgr.A01322 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8214851-8216850 Eucalyptus grandis
Eucgr.A01322 5.0kb upstream 5.0kb upstream 10643 true Chr01: 8216851-8227493 Eucalyptus grandis
Eucgr.A01322 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8222494-8227493 Eucalyptus grandis
Eucgr.A01322 5.0kb downstream 5.0kb downstream 10643 true Chr01: 8211851-8222493 Eucalyptus grandis
Eucgr.A01322 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8211851-8216850 Eucalyptus grandis
Eucgr.A01322 10.0kb upstream 10.0kb upstream 15643 true Chr01: 8216851-8232493 Eucalyptus grandis
Eucgr.A01322 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8222494-8232493 Eucalyptus grandis
Eucgr.A01322 10.0kb downstream 10.0kb downstream 15643 true Chr01: 8206851-8222493 Eucalyptus grandis
Eucgr.A01322 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8206851-8216850 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041515 5273 Angiosperm View MSA
124063862 5270 Rosid View MSA
123737904 5271 Pentapetalae View MSA
122786176 5272 Eudicot View MSA
121347053 5274 Embryophyte View MSA
123424674 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.80928 0.0 20.7239   Low
cufflinks 18.354 0.0 43.5988    
cufflinks 10.7464 0.0 30.4436    
cufflinks 33.2247 0.0 91.6577   High
cufflinks 17.2739 0.0 45.1762    
cufflinks 9.83701 0.0 24.6044    

0 Strain