Gene : Eucgr.A01293 E. grandis v2.0
Defline:  (1 of 15) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  979
Name:  ? Eucgr.A01293 Secondary Identifier:  ? PAC:32046343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A01293 0.5kb upstream 0.5kb upstream 2374 true Chr01: 21858971-21861344 Eucalyptus grandis
Eucgr.A01293 0.5kb upstream 0.5kb upstream 500 false Chr01: 21858971-21859470 Eucalyptus grandis
Eucgr.A01293 0.5kb downstream 0.5kb downstream 2374 true Chr01: 21859471-21861844 Eucalyptus grandis
Eucgr.A01293 0.5kb downstream 0.5kb downstream 500 false Chr01: 21861345-21861844 Eucalyptus grandis
Eucgr.A01293 1.0kb upstream 1.0kb upstream 2874 true Chr01: 21858471-21861344 Eucalyptus grandis
Eucgr.A01293 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21858471-21859470 Eucalyptus grandis
Eucgr.A01293 1.0kb downstream 1.0kb downstream 2874 true Chr01: 21859471-21862344 Eucalyptus grandis
Eucgr.A01293 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21861345-21862344 Eucalyptus grandis
Eucgr.A01293 2.0kb upstream 2.0kb upstream 3874 true Chr01: 21857471-21861344 Eucalyptus grandis
Eucgr.A01293 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21857471-21859470 Eucalyptus grandis
Eucgr.A01293 2.0kb downstream 2.0kb downstream 3874 true Chr01: 21859471-21863344 Eucalyptus grandis
Eucgr.A01293 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21861345-21863344 Eucalyptus grandis
Eucgr.A01293 5.0kb upstream 5.0kb upstream 6874 true Chr01: 21854471-21861344 Eucalyptus grandis
Eucgr.A01293 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21854471-21859470 Eucalyptus grandis
Eucgr.A01293 5.0kb downstream 5.0kb downstream 6874 true Chr01: 21859471-21866344 Eucalyptus grandis
Eucgr.A01293 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21861345-21866344 Eucalyptus grandis
Eucgr.A01293 10.0kb upstream 10.0kb upstream 11874 true Chr01: 21849471-21861344 Eucalyptus grandis
Eucgr.A01293 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21849471-21859470 Eucalyptus grandis
Eucgr.A01293 10.0kb downstream 10.0kb downstream 11874 true Chr01: 21859471-21871344 Eucalyptus grandis
Eucgr.A01293 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21861345-21871344 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069721 5270 Rosid View MSA
123751095 5271 Pentapetalae View MSA
122796235 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0211 0.0 2.86616   Low
cufflinks 102.85 0.0 242.114 High High
cufflinks 3.2367 0.0 8.12123    
cufflinks 43.193 0.0 96.5231 High  
cufflinks 74.5284 0.0 171.162 High  
cufflinks 1.21118 0.0 3.32794   Low

0 Strain